GE213291

Overview
NameGE213291
Unique NameGE213291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.008e-30
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE---IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQI RGL YIH+   V HRDLKP NLL++     +KICDFG A+     +    Y+ +R+YRAPEL+  +T+Y+ +ID+WS GC+  EL+  QPLFPG + + Q+  I +V+GTPT +E   IR  +        PQ     +  +F  R+ P A+DL  R+L ++P  R T
Sbjct:  144 YQILRGLKYIHSA-NVIHRDLKPSNLLLNA-NCDLKICDFGLARPSSESDMMTEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRQPLFPGRDHMHQMRLITEVIGTPTDDELGFIRNEDARKYMRHLPQYPRRTFASMF-PRVQPAALDLIERMLTFNPLQRIT 312          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.008e-30
Identity = 77/177 (43.50%), Postives = 110/177 (62.15%), Query Frame = -1
Query:   29 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 529
            YQI RGL YIH+   V HRDLKP NLL++  T  +KICDFG A+  IA   +        Y+ +R+YRAPE++  +  YT SIDIWS GC+LAE+L  +P+FPG++ +DQL  I+ VLG+P+R+++ C+      NY +   P     PW K+F       A+DL  ++L ++P  R
Sbjct:  194 YQILRGLKYIHSA-NVLHRDLKPSNLLLNK-TCDLKICDFGLAR--IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLE-SLPFKPNVPWAKLF-PNADALALDLLGKMLTFNPHKR 364          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.008e-30
Identity = 69/170 (40.59%), Postives = 108/170 (63.53%), Query Frame = -1
Query:   29 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 529
            YQI RG+AY H+  RV HRDLKPQNLL+D  T+ +K+ DFG A+         ++ + + +YRAPE++ G+  Y+T +DIWS GC+ AE++  +PLFPG++ +DQL +I +++GTP  +  R +   P+Y    FP+ K     + F   + P+ +DL S++L   P+ R
Sbjct:  109 YQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTWRGVTSLPDYKS-AFPKWKPTDL-ETFVPNLDPDGVDLLSKMLLMDPTKR 275          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.317e-30
Identity = 69/171 (40.35%), Postives = 106/171 (61.99%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQI RGL YIH+   V HRDLKP NLL++     +KICDFG A+     +    Y+ +R+YRAPEL+  +++YT +ID+WS GC+  EL+  +PLFPG + V QL  +++++GTP+  ++  +N N   +  + P  +   + + F   + PEAIDL  ++L + P  R T
Sbjct:  170 YQILRGLKYIHSA-NVLHRDLKPSNLLLNA-NCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKF-PHVHPEAIDLVEKMLTFDPRQRIT 337          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: CDKL2_RABIT (Cyclin-dependent kinase-like 2 OS=Oryctolagus cuniculus GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.317e-30
Identity = 67/173 (38.73%), Postives = 106/173 (61.27%), Query Frame = -1
Query:   20 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTC 529
            +QI  G+ + H+   + HRD+KP+N+LV   +  VK+CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+L+G+PLFPG++ +DQL  I++ LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R  C
Sbjct:  108 FQIINGIGFCHS-HNIIHRDIKPENILVSQ-SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMLMGEPLFPGDSDIDQLYLIMRCLGNLIPRHQELFYKNPVFAGVRLPEIKESEPLERRYPKLSEVVIDLAKKCLHVDPDKRPFC 278          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.720e-30
Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = -1
Query:   14 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTCPG 529
            YQI RGL YIH+   V HRDLKP NLL++     +KICDFG A+     +    Y+ +R+YRAPEL+  ++EYT +ID+WS GC+  EL+  +PLFPG + V QL  +++++GTP   ++  +N N   +   Q+  H   + F ++ P   P AIDL  ++L + P  R T  G
Sbjct:  175 YQILRGLKYIHSA-NVLHRDLKPSNLLLNA-NCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNSSEYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPNEADLDFVNENARRY-IRQLPRHA-RQSFPEKFPHVHPLAIDLVEKMLTFDPRQRITVEG 345          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: CDKL2_PONAB (Cyclin-dependent kinase-like 2 OS=Pongo abelii GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.934e-30
Identity = 66/173 (38.15%), Postives = 104/173 (60.12%), Query Frame = -1
Query:   20 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTC 529
            +QI  G+ + H+   + HRD+KP+N+LV   +  VK+CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+ +G+PLFPG++ +DQL  I+  LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R  C
Sbjct:  108 FQIINGIGFCHS-HNIIHRDIKPENILVSK-SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFYKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC 278          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: CDKL2_MACFA (Cyclin-dependent kinase-like 2 OS=Macaca fascicularis GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.934e-30
Identity = 66/173 (38.15%), Postives = 104/173 (60.12%), Query Frame = -1
Query:   20 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTC 529
            +QI  G+ + H+   + HRD+KP+N+LV   +  VK+CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+ +G+PLFPG++ +DQL  I+  LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R  C
Sbjct:  108 FQIINGIGFCHS-HNIIHRDIKPENILVSQ-SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFYKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC 278          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: CDKL2_HUMAN (Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.832e-30
Identity = 66/173 (38.15%), Postives = 104/173 (60.12%), Query Frame = -1
Query:   20 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTC 529
            +QI  G+ + H+   + HRD+KP+N+LV   +  VK+CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+ +G+PLFPG++ +DQL  I+  LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R  C
Sbjct:  108 FQIINGIGFCHS-HNIIHRDIKPENILVSQ-SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC 278          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: SUR1_CAEEL (Mitogen-activated protein kinase mpk-1 OS=Caenorhabditis elegans GN=mpk-1 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 5.004e-30
Identity = 72/174 (41.38%), Postives = 107/174 (61.49%), Query Frame = -1
Query:   29 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK----QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC-MNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 529
            YQI RGL YIH+   V HRDLKP NLL++  T  +KICDFG A+    Q         Y+ +R+YRAPE++  +  YT SID+WS GC+LAE+L  +PLFPG++ +DQL  I+ V+G+P+  +++C +N     +    P     PW +++     P A+DL  ++L ++P  R
Sbjct:  202 YQILRGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVTDPQTDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAEMLSNRPLFPGKHYLDQLNLILAVVGSPSNADLQCIINDKARSYLISLPHKPKQPWARLY-PGADPRALDLLDKMLTFNPHNR 372          
The following BLAST results are available for this feature:
BLAST of GE213291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK5_ORYSI1.008e-3042.44Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
ERKA_DROME1.008e-3043.50Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
CDKA1_ARATH1.008e-3040.59Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
MAPK_PEA1.317e-3040.35Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
CDKL2_RABIT1.317e-3038.73Cyclin-dependent kinase-like 2 OS=Oryctolagus cuni... [more]
MPK1_ORYSJ1.720e-3041.14Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
CDKL2_PONAB2.934e-3038.15Cyclin-dependent kinase-like 2 OS=Pongo abelii GN=... [more]
CDKL2_MACFA2.934e-3038.15Cyclin-dependent kinase-like 2 OS=Macaca fascicula... [more]
CDKL2_HUMAN3.832e-3038.15Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=... [more]
SUR1_CAEEL5.004e-3041.38Mitogen-activated protein kinase mpk-1 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank description145 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.