FC871685

Overview
NameFC871685
Unique NameFC871685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CHLCV (GTP-binding protein lepA OS=Chlamydophila caviae GN=lepA PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.495e-67
Identity = 126/172 (73.26%), Postives = 147/172 (85.47%), Query Frame = 1
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            NIRNFSIIAHIDHGKST+AD+LL+ T TV++REM+EQ LD+MDLERERGITIK     M Y +  E + LNLIDTPGHVDFSYEVSRSLAACEGALL+VDA+QGV+AQ+LANVYLALE +LEIIP+LNKIDLP A P R+ ++IE+ IGLD T+AI CSAK G GI+EIL A
Sbjct:    8 NIRNFSIIAHIDHGKSTIADRLLESTSTVEQREMREQLLDSMDLERERGITIKAHPVTMYYEYNGEVYQLNLIDTPGHVDFSYEVSRSLAACEGALLIVDAAQGVQAQSLANVYLALERDLEIIPILNKIDLPAANPERIRKQIEDYIGLDTTHAIACSAKTGEGISEILEA 179          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_MESSB (GTP-binding protein lepA OS=Mesorhizobium sp. (strain BNC1) GN=lepA PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.108e-66
Identity = 124/181 (68.51%), Postives = 152/181 (83.98%), Query Frame = 1
Query:  172 RLLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            R+   P  NIRNF+I+AHIDHGKSTLAD+L+QMTG++++REMKEQ LD+MD+ERERGITIK    R+ Y   + E + LNLIDTPGHVDF+YEVSRSLAACE +LLVVDASQGVEAQTLANVY A++NN EI+PVLNK+DLP AEP RV  +IE+VIGLD ++AI  SAK G+G++E+L A
Sbjct:    3 RMTNTPIKNIRNFAIVAHIDHGKSTLADRLIQMTGSLEEREMKEQVLDSMDIERERGITIKANTVRLEYDARDGEHYVLNLIDTPGHVDFAYEVSRSLAACESSLLVVDASQGVEAQTLANVYQAIDNNHEIVPVLNKVDLPAAEPERVKAQIEDVIGLDASDAIPISAKTGVGVDEVLEA 183          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_DESRM (GTP-binding protein lepA OS=Desulfotomaculum reducens (strain MI-1) GN=lepA PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.108e-66
Identity = 130/177 (73.45%), Postives = 150/177 (84.75%), Query Frame = 1
Query:  178 LKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            +  P + IRNF IIAHIDHGKSTLAD++L+ TG + +REM EQ LD MDLERERGITIKLQA R+ +  E+ + + LNLIDTPGHVDF+YEVSRSLAACEGALLVVDASQG+EAQTLANVYLALEN+LEIIPV+NKIDLP AEP RV +EIE+VIGLD + A+L SAK G GI EIL
Sbjct:    1 MSTPQNRIRNFCIIAHIDHGKSTLADRILEETGALSQREMTEQVLDKMDLERERGITIKLQAVRLFHRAEDGQEYQLNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGIEAQTLANVYLALENDLEIIPVINKIDLPSAEPERVKQEIEDVIGLDTSEAVLASAKTGAGIKEIL 177          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_WOLSU (GTP-binding protein lepA OS=Wolinella succinogenes GN=lepA PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.447e-66
Identity = 122/171 (71.35%), Postives = 147/171 (85.96%), Query Frame = 1
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILN 708
            NIRNFSIIAHIDHGKSTLAD+L+Q  G V+ R+MK Q +D MD+E+ERGITIK Q+ R+ Y +E E + LNLIDTPGHVDFSYEVSRSLA+CEGALLVVDASQGVEAQT+ANVY+AL+N LEI+PV+NKIDLP A+P RV +EIE+ IGLDC+ A+  SAK G+GI E+L+
Sbjct:    3 NIRNFSIIAHIDHGKSTLADRLIQECGAVEARDMKAQLMDTMDIEKERGITIKAQSVRLSYRYEGEDYILNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALDNELEILPVINKIDLPAADPLRVKQEIEQTIGLDCSGALHVSAKSGLGIKELLD 173          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_SYMTH (GTP-binding protein lepA OS=Symbiobacterium thermophilum GN=lepA PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.447e-66
Identity = 129/177 (72.88%), Postives = 152/177 (85.88%), Query Frame = 1
Query:  184 VPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            V   +IRNF IIAHIDHGKSTLAD+L++ TG + KREM +Q LDNM+LERERGITIK Q+ RM YV ++ E + LNLIDTPGHVDF+YEVSR+LAACEGALLVVDASQG+EAQTLANVY+ALE++LEIIPV+NKIDLP A+P +V +EIEEVIGLD + AIL SAK GIG+ EIL A
Sbjct:    2 VDQRHIRNFCIIAHIDHGKSTLADRLIEFTGVLTKREMTDQVLDNMELERERGITIKAQSVRMDYVADDGEQYVLNLIDTPGHVDFTYEVSRALAACEGALLVVDASQGIEAQTLANVYMALEHDLEIIPVINKIDLPAADPEKVKKEIEEVIGLDTSIAILASAKTGIGMKEILEA 178          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_FUSNN (GTP-binding protein lepA OS=Fusobacterium nucleatum subsp. nucleatum GN=lepA PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.447e-66
Identity = 128/173 (73.99%), Postives = 149/173 (86.13%), Query Frame = 1
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            N RNFSIIAHIDHGKST+AD+LL+ TGTV +R+MKEQ LD+MDLERE+GITIK QA  + Y  +N E + LNLIDTPGHVDF YEVSRSLAACEGALLVVDA+QGVEAQTLANVYLA+ENNLEI+P++NKIDLP AEP +V REIE++IGL   +A+L SAK GIGI +IL A
Sbjct:    9 NKRNFSIIAHIDHGKSTIADRLLEYTGTVSERDMKEQILDSMDLEREKGITIKAQAVTLFYKAKNGEEYELNLIDTPGHVDFIYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLAIENNLEILPIINKIDLPAAEPEKVKREIEDIIGLPADDAVLASAKNGIGIEDILEA 181          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_GEOSF (GTP-binding protein lepA OS=Geobacter sp. (strain FRC-32) GN=lepA PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.890e-66
Identity = 128/171 (74.85%), Postives = 146/171 (85.38%), Query Frame = 1
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            NIRNFSIIAHIDHGKSTLAD+LL+ TG + +REM+ Q LD MDLERERGITIK QA R+ Y   +   + LNLIDTPGHVDF+YEVSRSL+ACEGALLVVDASQGVEAQTLANVYLALEN+L++ PVLNKIDLP AEP RV +EIE++IGLD  +A+L SAKEGIG  EIL
Sbjct:    5 NIRNFSIIAHIDHGKSTLADRLLEYTGALTEREMQNQVLDKMDLERERGITIKAQAVRLNYQANDGRQYILNLIDTPGHVDFTYEVSRSLSACEGALLVVDASQGVEAQTLANVYLALENDLDVFPVLNKIDLPAAEPERVKQEIEDIIGLDAHDAVLASAKEGIGTREIL 175          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_GEOLS (GTP-binding protein lepA OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=lepA PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.890e-66
Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 1
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD+LL+ TG +  REM+ QFLD MDLERERGITIK Q  R+ Y  ++   + LNLIDTPGHVDF+YEVSRSLAACEG LLVVDASQGVEAQTLANVYLAL+N+LE+ PVLNKIDLP AEP RV  EIEE+IG+D  +A+L SAKEGIG  EIL
Sbjct:    4 SKIRNFSIIAHIDHGKSTLADRLLEYTGALTAREMQSQFLDKMDLERERGITIKAQTVRLNYTADDGNTYVLNLIDTPGHVDFTYEVSRSLAACEGGLLVVDASQGVEAQTLANVYLALDNDLEVFPVLNKIDLPAAEPERVKHEIEEIIGIDAHDAVLASAKEGIGTREIL 175          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CHLTR (GTP-binding protein lepA OS=Chlamydia trachomatis GN=lepA PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.890e-66
Identity = 125/172 (72.67%), Postives = 146/172 (84.88%), Query Frame = 1
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            NIRNFSIIAHIDHGKST+AD+LL+ T T+++REM+EQ LD+MDLERERGITIK     M Y +E E + LNLIDTPGHVDFSYEVSRSLAACEGALL+VDA+QGV+AQ+LANVYLALE +LEIIPVLNKIDLP A+P  + ++IEE IGLD +N I CSAK G GI EIL +
Sbjct:    8 NIRNFSIIAHIDHGKSTIADRLLESTSTIEQREMREQLLDSMDLERERGITIKAHPVTMTYEYEGETYELNLIDTPGHVDFSYEVSRSLAACEGALLIVDAAQGVQAQSLANVYLALERDLEIIPVLNKIDLPAAQPEAIKKQIEEFIGLDTSNTIACSAKTGQGIPEILES 179          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CHLTB (GTP-binding protein lepA OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=lepA PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.890e-66
Identity = 125/172 (72.67%), Postives = 146/172 (84.88%), Query Frame = 1
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            NIRNFSIIAHIDHGKST+AD+LL+ T T+++REM+EQ LD+MDLERERGITIK     M Y +E E + LNLIDTPGHVDFSYEVSRSLAACEGALL+VDA+QGV+AQ+LANVYLALE +LEIIPVLNKIDLP A+P  + ++IEE IGLD +N I CSAK G GI EIL +
Sbjct:    8 NIRNFSIIAHIDHGKSTIADRLLESTSTIEQREMREQLLDSMDLERERGITIKAHPVTMTYEYEGETYELNLIDTPGHVDFSYEVSRSLAACEGALLIVDAAQGVQAQSLANVYLALERDLEIIPVLNKIDLPAAQPEAIKKQIEEFIGLDTSNTIACSAKTGQGIPEILES 179          
The following BLAST results are available for this feature:
BLAST of FC871685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LEPA_CHLCV6.495e-6773.26GTP-binding protein lepA OS=Chlamydophila caviae G... [more]
LEPA_MESSB1.108e-6668.51GTP-binding protein lepA OS=Mesorhizobium sp. (str... [more]
LEPA_DESRM1.108e-6673.45GTP-binding protein lepA OS=Desulfotomaculum reduc... [more]
LEPA_WOLSU1.447e-6671.35GTP-binding protein lepA OS=Wolinella succinogenes... [more]
LEPA_SYMTH1.447e-6672.88GTP-binding protein lepA OS=Symbiobacterium thermo... [more]
LEPA_FUSNN1.447e-6673.99GTP-binding protein lepA OS=Fusobacterium nucleatu... [more]
LEPA_GEOSF1.890e-6674.85GTP-binding protein lepA OS=Geobacter sp. (strain ... [more]
LEPA_GEOLS1.890e-6674.42GTP-binding protein lepA OS=Geobacter lovleyi (str... [more]
LEPA_CHLTR1.890e-6672.67GTP-binding protein lepA OS=Chlamydia trachomatis ... [more]
LEPA_CHLTB1.890e-6672.67GTP-binding protein lepA OS=Chlamydia trachomatis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1CA10FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871685 ID=FC871685; Name=FC871685; organism=Citrus sinensis; type=EST; length=711bp
ACGTTTGCAACACTAAAGAAGCCTCACATCTCATCACTCTCACATTTCCT
TTCTAAATCTCACCGGCGCTGCAATTATTCTCTCTCTATCTCTAAACATA
GCTGTATCTTTCGAGTCTCTTGCCAGAGCCAGGCTACAGATGCCGAGTTG
GCCACTCGAGCTGGACAGGACCGTCTCTTAAAGGTTCCTGCATCAAACAT
AAGGAACTTCAGCATAATAGCTCATATTGATCATGGGAAGTCGACTTTAG
CCGACAAATTGTTGCAAATGACTGGCACTGTACAGAAGCGAGAAATGAAG
GAGCAGTTTCTCGATAACATGGATTTGGAGAGAGAACGAGGCATCACTAT
CAAACTACAGGCAGCTCGAATGCGTTATGTATTCGAAAATGAACCGTTTT
GCTTGAATCTTATTGACACGCCAGGGCATGTGGACTTCTCGTATGAGGTT
TCTCGTTCTCTTGCTGCATGTGAGGGTGCTCTCCTTGTTGTAGATGCTTC
TCAGGGAGTGGAAGCCCAAACACTGGCTAATGTCTATTTGGCTTTGGAAA
ACAATCTTGAAATTATCCCAGTGTTGAACAAAATAGATCTTCCTGGTGCT
GAACCGAGTCGTGTTGCTCGGGAAATTGAAGAGGTTATTGGGCTAGATTG
TACCAATGCAATTCTCTGCTCTGCAAAGGAGGGCATTGGTATAAATGAAA
TTCTGAATGCA
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