FC871685

Overview
NameFC871685
Unique NameFC871685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CAMJJ (GTP-binding protein lepA OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=lepA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 120/170 (70.59%), Postives = 142/170 (83.53%), Query Frame = 1 
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            NIRNFSIIAHIDHGKSTLAD+++   G +  R+M  Q +D MD+E+ERGITIK Q+ R+ Y F NE F LNLIDTPGHVDFSYEVSRSLA+CEGALLVVDASQGVEAQT+ANVY+ALENNLEIIPV+NKIDLP A+  +V  EIE +IG+DC +AI  SAK G+GI E++
Sbjct:    5 NIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAICVSAKTGVGIKELI 174
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CAMJE (GTP-binding protein lepA OS=Campylobacter jejuni GN=lepA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 120/170 (70.59%), Postives = 142/170 (83.53%), Query Frame = 1 
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            NIRNFSIIAHIDHGKSTLAD+++   G +  R+M  Q +D MD+E+ERGITIK Q+ R+ Y F NE F LNLIDTPGHVDFSYEVSRSLA+CEGALLVVDASQGVEAQT+ANVY+ALENNLEIIPV+NKIDLP A+  +V  EIE +IG+DC +AI  SAK G+GI E++
Sbjct:    5 NIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAICVSAKTGVGIKELI 174
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CAMJD (GTP-binding protein lepA OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=lepA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 120/170 (70.59%), Postives = 142/170 (83.53%), Query Frame = 1 
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            NIRNFSIIAHIDHGKSTLAD+++   G +  R+M  Q +D MD+E+ERGITIK Q+ R+ Y F NE F LNLIDTPGHVDFSYEVSRSLA+CEGALLVVDASQGVEAQT+ANVY+ALENNLEIIPV+NKIDLP A+  +V  EIE +IG+DC +AI  SAK G+GI E++
Sbjct:    3 NIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAICVSAKTGVGIKELI 172
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CAMJ8 (GTP-binding protein lepA OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=lepA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 120/170 (70.59%), Postives = 142/170 (83.53%), Query Frame = 1 
Query:  196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            NIRNFSIIAHIDHGKSTLAD+++   G +  R+M  Q +D MD+E+ERGITIK Q+ R+ Y F NE F LNLIDTPGHVDFSYEVSRSLA+CEGALLVVDASQGVEAQT+ANVY+ALENNLEIIPV+NKIDLP A+  +V  EIE +IG+DC +AI  SAK G+GI E++
Sbjct:    5 NIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAICVSAKTGVGIKELI 174
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACSU (GTP-binding protein lepA OS=Bacillus subtilis GN=lepA PE=3 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 123/172 (71.51%), Postives = 149/172 (86.63%), Query Frame = 1 
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMKEQ LD+MDLERERGITIKL + +++Y   + E +  +LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+N+LEI+PV+NKIDLP AEP RV +E+E+VIGLD + A+L SAK GIGI EIL
Sbjct:   12 SRIRNFSIIAHIDHGKSTLADRILEKTSAITQREMKEQLLDSMDLERERGITIKLNSVQLKYKAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASEAVLASAKAGIGIEEIL 183
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACP2 (GTP-binding protein lepA OS=Bacillus pumilus (strain SAFR-032) GN=lepA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 123/172 (71.51%), Postives = 149/172 (86.63%), Query Frame = 1 
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMKEQ LD+MDLERERGITIKL + +++Y   + E + ++LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+NNLEI+P++NKIDLP AEP RV  EIE+VIGLD + A+L SAK GIGI +IL
Sbjct:   12 SRIRNFSIIAHIDHGKSTLADRILEKTAAITQREMKEQLLDSMDLERERGITIKLNSVQLKYKAKDGEEYIMHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPIINKIDLPSAEPERVRGEIEDVIGLDASEAVLTSAKAGIGIEDIL 183
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACLD (GTP-binding protein lepA OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=lepA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 123/172 (71.51%), Postives = 149/172 (86.63%), Query Frame = 1 
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMKEQ LD+MDLERERGITIKL + +++Y   + E +  +LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+N+LEI+PV+NKIDLP AEP RV +E+E+VIGLD + A+L SAK GIGI EIL
Sbjct:   12 SRIRNFSIIAHIDHGKSTLADRILEKTAAITQREMKEQLLDSMDLERERGITIKLNSVQLKYQAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASEAVLASAKAGIGIEEIL 183
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_CAMFF (GTP-binding protein lepA OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=lepA PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.600e-65
Identity = 122/171 (71.35%), Postives = 142/171 (83.04%), Query Frame = 1 
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            +NIRNFSIIAHIDHGKSTLAD+++   G V  R M  Q +D MD+E+ERGITIK Q+ R+ Y  E + + LNLIDTPGHVDFSYEVSRSLA+CEGALLVVDASQGVEAQT+ANVY+ALENNLEIIPV+NKIDLP AEP RV  EIE +IGLDC+ AI  SAK G+GI E++
Sbjct:    2 NNIRNFSIIAHIDHGKSTLADRIISECGAVDSRVMSAQVMDTMDIEKERGITIKAQSVRLTYKLEGQIYILNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPAAEPQRVKNEIEHIIGLDCSEAIEVSAKTGVGIKELI 172
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACHK (GTP-binding protein lepA OS=Bacillus thuringiensis subsp. konkukian GN=lepA PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.600e-65
Identity = 124/172 (72.09%), Postives = 148/172 (86.05%), Query Frame = 1 
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMK Q LD+MDLERERGITIKL A ++ Y   + E + L+LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+NNLEI+PV+NKIDLP A+P RV +E+E+VIGLD + A+L SAK GIGI EIL
Sbjct:   11 SKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAVQLNYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEIL 182
[Close]
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACCZ (GTP-binding protein lepA OS=Bacillus cereus (strain ZK / E33L) GN=lepA PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.600e-65
Identity = 124/172 (72.09%), Postives = 148/172 (86.05%), Query Frame = 1 
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMK Q LD+MDLERERGITIKL A ++ Y   + E + L+LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+NNLEI+PV+NKIDLP A+P RV +E+E+VIGLD + A+L SAK GIGI EIL
Sbjct:   11 SKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAVQLNYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEIL 182
The following BLAST results are available for this feature:
BLAST of FC871685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LEPA_CAMJJ1.225e-6570.59GTP-binding protein lepA OS=Campylobacter jejuni s... [more]
LEPA_CAMJE1.225e-6570.59GTP-binding protein lepA OS=Campylobacter jejuni G... [more]
LEPA_CAMJD1.225e-6570.59GTP-binding protein lepA OS=Campylobacter jejuni s... [more]
LEPA_CAMJ81.225e-6570.59GTP-binding protein lepA OS=Campylobacter jejuni s... [more]
LEPA_BACSU1.225e-6571.51GTP-binding protein lepA OS=Bacillus subtilis GN=l... [more]
LEPA_BACP21.225e-6571.51GTP-binding protein lepA OS=Bacillus pumilus (stra... [more]
LEPA_BACLD1.225e-6571.51GTP-binding protein lepA OS=Bacillus licheniformis... [more]
LEPA_CAMFF1.600e-6571.35GTP-binding protein lepA OS=Campylobacter fetus su... [more]
LEPA_BACHK1.600e-6572.09GTP-binding protein lepA OS=Bacillus thuringiensis... [more]
LEPA_BACCZ1.600e-6572.09GTP-binding protein lepA OS=Bacillus cereus (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1CA10FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871685 ID=FC871685; Name=FC871685; organism=Citrus sinensis; type=EST; length=711bp
ACGTTTGCAACACTAAAGAAGCCTCACATCTCATCACTCTCACATTTCCT
TTCTAAATCTCACCGGCGCTGCAATTATTCTCTCTCTATCTCTAAACATA
GCTGTATCTTTCGAGTCTCTTGCCAGAGCCAGGCTACAGATGCCGAGTTG
GCCACTCGAGCTGGACAGGACCGTCTCTTAAAGGTTCCTGCATCAAACAT
AAGGAACTTCAGCATAATAGCTCATATTGATCATGGGAAGTCGACTTTAG
CCGACAAATTGTTGCAAATGACTGGCACTGTACAGAAGCGAGAAATGAAG
GAGCAGTTTCTCGATAACATGGATTTGGAGAGAGAACGAGGCATCACTAT
CAAACTACAGGCAGCTCGAATGCGTTATGTATTCGAAAATGAACCGTTTT
GCTTGAATCTTATTGACACGCCAGGGCATGTGGACTTCTCGTATGAGGTT
TCTCGTTCTCTTGCTGCATGTGAGGGTGCTCTCCTTGTTGTAGATGCTTC
TCAGGGAGTGGAAGCCCAAACACTGGCTAATGTCTATTTGGCTTTGGAAA
ACAATCTTGAAATTATCCCAGTGTTGAACAAAATAGATCTTCCTGGTGCT
GAACCGAGTCGTGTTGCTCGGGAAATTGAAGAGGTTATTGGGCTAGATTG
TACCAATGCAATTCTCTGCTCTGCAAAGGAGGGCATTGGTATAAATGAAA
TTCTGAATGCA
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