FC871685

Overview
NameFC871685
Unique NameFC871685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_RHIL3 (GTP-binding protein lepA OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=lepA PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.089e-65
Identity = 124/176 (70.45%), Postives = 147/176 (83.52%), Query Frame = 1
Query:  187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            P S+IRNFSI+AHIDHGKSTLAD+L+Q TG + +REM EQ LDNMD+ERERGITIK Q  R+ Y   N E + LNLIDTPGHVDF+YEVSRSL+ACEG+LLVVDASQGVEAQTLANVY A++NN EI+ VLNKIDLP AEP R+  +IEEVIG+D + A+L SAK G+GI ++L A
Sbjct:   11 PLSHIRNFSIVAHIDHGKSTLADRLIQTTGGLAEREMSEQVLDNMDIERERGITIKAQTVRLHYQANNGEKYILNLIDTPGHVDFAYEVSRSLSACEGSLLVVDASQGVEAQTLANVYQAIDNNHEIVTVLNKIDLPAAEPDRIKEQIEEVIGIDASEAVLISAKTGLGIPDVLEA 186          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_MYCCT (GTP-binding protein lepA OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=lepA PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.089e-65
Identity = 121/174 (69.54%), Postives = 153/174 (87.93%), Query Frame = 1
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEP-FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            S IRNFSIIAHIDHGKSTLAD++L++T TV+KREM++Q LD+MD+ERERGITIKL + +++Y  +++  +  NLIDTPGHVDF+YEVSRSLAACEGA+LVVDASQGVEAQTLANVYLA+++NLEIIPV+NKIDLP A+  +V +EIEE+IGLDC+NA L SAK G+ + ++L A
Sbjct:    4 SKIRNFSIIAHIDHGKSTLADRILELTNTVEKREMQDQLLDSMDIERERGITIKLNSVQLKYHSKDDKDYIFNLIDTPGHVDFTYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAIDSNLEIIPVINKIDLPSADVDKVKQEIEEIIGLDCSNAPLISAKTGLNVQDVLQA 177          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_HELHP (GTP-binding protein lepA OS=Helicobacter hepaticus GN=lepA PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.089e-65
Identity = 121/178 (67.98%), Postives = 146/178 (82.02%), Query Frame = 1
Query:  172 RLLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            + L VP   IRNFSIIAHIDHGKSTLAD+L+Q  G V +REM  Q +D MD+E+ERGITIK Q+ R+ Y ++ + + LNLIDTPGHVDFSYEVSRSL++CEGALLVVDASQGVEAQT+ANVY+A+ENNLEI+PV+NKIDLP A+P RVA +IE  IGLDCT+ +  SAK G GI  +L
Sbjct:    2 KALIVPQEYIRNFSIIAHIDHGKSTLADRLIQECGAVSEREMTAQIMDTMDIEKERGITIKAQSVRLNYPYKGQTYTLNLIDTPGHVDFSYEVSRSLSSCEGALLVVDASQGVEAQTIANVYIAMENNLEILPVINKIDLPAADPLRVAEDIESTIGLDCTDVLQVSAKSGEGIKNLL 179          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACAN (GTP-binding protein lepA OS=Bacillus anthracis GN=lepA PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.089e-65
Identity = 124/172 (72.09%), Postives = 148/172 (86.05%), Query Frame = 1
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMK Q LD+MDLERERGITIKL A ++ Y   + E + L+LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+NNLEI+PV+NKIDLP A+P RV +E+E+VIGLD + A+L SAK GIGI EIL
Sbjct:   11 SKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAIQLNYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEIL 182          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACAA (GTP-binding protein lepA OS=Bacillus anthracis (strain A0248) GN=lepA PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.089e-65
Identity = 124/172 (72.09%), Postives = 148/172 (86.05%), Query Frame = 1
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMK Q LD+MDLERERGITIKL A ++ Y   + E + L+LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+NNLEI+PV+NKIDLP A+P RV +E+E+VIGLD + A+L SAK GIGI EIL
Sbjct:   11 SKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAIQLNYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEIL 182          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_BACA2 (GTP-binding protein lepA OS=Bacillus amyloliquefaciens (strain FZB42) GN=lepA PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.089e-65
Identity = 122/172 (70.93%), Postives = 150/172 (87.21%), Query Frame = 1
Query:  193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            S IRNFSIIAHIDHGKSTLAD++L+ T  + +REMKEQ LD+MDLERERGITIKL + +++Y   + E +  +LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+N+LEI+PV+NKIDLP AEP RV +E+E+VIGLD ++A+L SAK GIGI +IL
Sbjct:   12 SRIRNFSIIAHIDHGKSTLADRILEKTSAITQREMKEQLLDSMDLERERGITIKLNSVQLKYKAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASDAVLASAKAGIGIEDIL 183          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_RHILW (GTP-binding protein lepA OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=lepA PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.564e-65
Identity = 123/176 (69.89%), Postives = 147/176 (83.52%), Query Frame = 1
Query:  187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            P S+IRNFSI+AHIDHGKSTLAD+L+Q TG + +REM EQ LDNMD+ERERGITIK Q  R+ Y   N E + LNLIDTPGHVDF+YEVSRSL+ACEG+LLVVDASQGVEAQTLANVY A++NN E++ VLNKIDLP AEP R+  +IEEVIG+D + A+L SAK G+GI ++L A
Sbjct:   11 PLSHIRNFSIVAHIDHGKSTLADRLIQTTGGLAEREMSEQVLDNMDIERERGITIKAQTVRLHYQANNGEKYILNLIDTPGHVDFAYEVSRSLSACEGSLLVVDASQGVEAQTLANVYQAIDNNHELVTVLNKIDLPAAEPDRIKEQIEEVIGIDASEAVLISAKTGLGIPDVLEA 186          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_RHIE6 (GTP-binding protein lepA OS=Rhizobium etli (strain CIAT 652) GN=lepA PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.564e-65
Identity = 123/176 (69.89%), Postives = 147/176 (83.52%), Query Frame = 1
Query:  187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNA 711
            P S+IRNFSI+AHIDHGKSTLAD+L+Q TG + +REM EQ LDNMD+ERERGITIK Q  R+ Y   N E + LNLIDTPGHVDF+YEVSRSL+ACEG+LLVVDASQGVEAQTLANVY A++NN E++ VLNKIDLP AEP R+  +IEEVIG+D + A+L SAK G+GI ++L A
Sbjct:   11 PLSHIRNFSIVAHIDHGKSTLADRLIQTTGGLAEREMSEQVLDNMDIERERGITIKAQTVRLHYQANNGEKYILNLIDTPGHVDFAYEVSRSLSACEGSLLVVDASQGVEAQTLANVYQAIDNNHELVTVLNKIDLPAAEPDRIKEQIEEVIGIDASEAVLISAKTGLGIPDVLEA 186          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_GEOKA (GTP-binding protein lepA OS=Geobacillus kaustophilus GN=lepA PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.564e-65
Identity = 123/170 (72.35%), Postives = 149/170 (87.65%), Query Frame = 1
Query:  199 IRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            IRNFSIIAHIDHGKSTLAD++L+ TG + +RE++EQ LD M+LERERGITIKL A ++ Y  +N E +  +LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLA++NNLEI+PV+NKIDLP AEP RV +EIE+VIGLD ++A+L SAK GIGI EIL
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTGALSERELREQTLDTMELERERGITIKLNAVQLTYKAKNGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLAIDNNLEILPVINKIDLPSAEPERVRQEIEDVIGLDASDAVLASAKVGIGIEEIL 182          
BLAST of FC871685 vs. ExPASy Swiss-Prot
Match: LEPA_STRS7 (GTP-binding protein lepA OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=lepA PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.654e-65
Identity = 125/177 (70.62%), Postives = 149/177 (84.18%), Query Frame = 1
Query:  178 LKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEIL 705
            LK    NIRNFSIIAHIDHGKSTLAD++L+ T TV  REM+ Q LD+MDLERERGITIKL A  + Y  +N + +  +LIDTPGHVDF+YEVSRSLAACEGA+LVVDA+QG+EAQTLANVYLAL+N+LEI+PV+NKIDLP A+P RV +EIE+VIGLD + A+L SAK GIGI +IL
Sbjct:    6 LKKRQENIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYKAKNGQTYIFHLIDTPGHVDFTYEVSRSLAACEGAVLVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEIEDVIGLDASEAVLASAKSGIGIEDIL 182          
The following BLAST results are available for this feature:
BLAST of FC871685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LEPA_RHIL32.089e-6570.45GTP-binding protein lepA OS=Rhizobium leguminosaru... [more]
LEPA_MYCCT2.089e-6569.54GTP-binding protein lepA OS=Mycoplasma capricolum ... [more]
LEPA_HELHP2.089e-6567.98GTP-binding protein lepA OS=Helicobacter hepaticus... [more]
LEPA_BACAN2.089e-6572.09GTP-binding protein lepA OS=Bacillus anthracis GN=... [more]
LEPA_BACAA2.089e-6572.09GTP-binding protein lepA OS=Bacillus anthracis (st... [more]
LEPA_BACA22.089e-6570.93GTP-binding protein lepA OS=Bacillus amyloliquefac... [more]
LEPA_RHILW3.564e-6569.89GTP-binding protein lepA OS=Rhizobium leguminosaru... [more]
LEPA_RHIE63.564e-6569.89GTP-binding protein lepA OS=Rhizobium etli (strain... [more]
LEPA_GEOKA3.564e-6572.35GTP-binding protein lepA OS=Geobacillus kaustophil... [more]
LEPA_STRS74.654e-6570.62GTP-binding protein lepA OS=Streptococcus equi sub... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1CA10FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871685 ID=FC871685; Name=FC871685; organism=Citrus sinensis; type=EST; length=711bp
ACGTTTGCAACACTAAAGAAGCCTCACATCTCATCACTCTCACATTTCCT
TTCTAAATCTCACCGGCGCTGCAATTATTCTCTCTCTATCTCTAAACATA
GCTGTATCTTTCGAGTCTCTTGCCAGAGCCAGGCTACAGATGCCGAGTTG
GCCACTCGAGCTGGACAGGACCGTCTCTTAAAGGTTCCTGCATCAAACAT
AAGGAACTTCAGCATAATAGCTCATATTGATCATGGGAAGTCGACTTTAG
CCGACAAATTGTTGCAAATGACTGGCACTGTACAGAAGCGAGAAATGAAG
GAGCAGTTTCTCGATAACATGGATTTGGAGAGAGAACGAGGCATCACTAT
CAAACTACAGGCAGCTCGAATGCGTTATGTATTCGAAAATGAACCGTTTT
GCTTGAATCTTATTGACACGCCAGGGCATGTGGACTTCTCGTATGAGGTT
TCTCGTTCTCTTGCTGCATGTGAGGGTGCTCTCCTTGTTGTAGATGCTTC
TCAGGGAGTGGAAGCCCAAACACTGGCTAATGTCTATTTGGCTTTGGAAA
ACAATCTTGAAATTATCCCAGTGTTGAACAAAATAGATCTTCCTGGTGCT
GAACCGAGTCGTGTTGCTCGGGAAATTGAAGAGGTTATTGGGCTAGATTG
TACCAATGCAATTCTCTGCTCTGCAAAGGAGGGCATTGGTATAAATGAAA
TTCTGAATGCA
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