EY679884

Overview
NameEY679884
Unique NameEY679884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.568e-49
Identity = 85/158 (53.80%), Postives = 113/158 (71.52%), Query Frame = 3
Query:   60 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            KAFGWAA+D+SGHLSPF+F+RR+   +DV LK+LYCG+CH+DL  +KN+WGF+ +P+VPGHEIAG VT+                     +C  CE C  DLE+YCPK + TY+S    GT T GGYSD +V ++R++++FPD++PLDA APLLCAGI
Sbjct:    5 KAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-PYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGI 161          

HSP 2 Score: 28.1054 bits (61), Expect = 1.568e-49
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P++  +G+ E GKH  + GLGG
Sbjct:  162 TVYSPMKY-YGMTEPGKHLGVAGLGG 186          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.748e-49
Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 3
Query:   60 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            +AFG AA+D SG LSPF+FSRR TG++DVR KVL+CGICHTDL+  KNEWG + +P+VPGHEI G VTE                     +C SC+SC +  ENYCPKMILT  + N D T+T GGYSDHMV  E +I+R PD++PLD AAPLLCAG+
Sbjct:    8 EAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGV 165          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.836e-47
Identity = 83/158 (52.53%), Postives = 108/158 (68.35%), Query Frame = 3
Query:   60 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            +AFGWAA D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT   GGYSD +V + R+++  PD +P D+ APLLCAGI
Sbjct:    6 RAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 163          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.606e-46
Identity = 85/177 (48.02%), Postives = 110/177 (62.15%), Query Frame = 3
Query:    3 NIAVLSSKMAKSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            N+    +  A+   EEH   A GWAARD SG LSP+NFSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD +V NE Y++R P  +PLD AAPLLCAG+
Sbjct:   63 NLQRARASAAEQGMEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGV 239          

HSP 2 Score: 25.7942 bits (55), Expect = 2.606e-46
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P+ I  GL   GKH  + GLGG
Sbjct:  240 TVYSPMVI-HGLNAPGKHVGVVGLGG 264          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.094e-46
Identity = 84/159 (52.83%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   60 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTI-TFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            KAFGWAA D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT    GGYSD +V + R+++  PD +P D+ APLLCAGI
Sbjct:    6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 164          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.426e-46
Identity = 87/180 (48.33%), Postives = 111/180 (61.67%), Query Frame = 3
Query:    3 NIAVLSSKMAKSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTD---GTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            N+    +  A+   EEH   A GWAARD SG LSP+NFSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C  CE C N  ENYC KM+ T + ++ D   G  T GG+SD +V NE Y++R P  +PLD+AAPLLCAG+
Sbjct:   63 NLQRARASAAEQGMEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGV 242          

HSP 2 Score: 25.7942 bits (55), Expect = 4.426e-46
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P+ I  GL   GKH  + GLGG
Sbjct:  243 TVYSPMVI-HGLNAPGKHVGVVGLGG 267          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.347e-46
Identity = 89/168 (52.98%), Postives = 110/168 (65.48%), Query Frame = 3
Query:   30 AKSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLD-AAAPLLCAG 530
            A   E EHP KAFGWAARDSSG LSPFNFSRR+ G+EDV L+VLYCGICHTDL   KN++G S++P VPGHE+ G V E                     +C SC++C ++LENYCPK ILT    + DGT T+GGYSD MV +E ++ R P+ +PLD   +  LC G
Sbjct:    3 ASQVEFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWG 170          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.173e-45
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 3
Query:   45 EEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            E +   A GWAARD+SGHLSPF+F+RR   ++DV +KVLYCGICHTDL  IKNEWG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y+VR P S+P D AAPLLCAG+
Sbjct:    2 EHNGTAALGWAARDTSGHLSPFSFTRRVQQEDDVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGV 164          

HSP 2 Score: 27.335 bits (59), Expect = 2.173e-45
Identity = 25/68 (36.76%), Postives = 33/68 (48.53%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGGAWSCRWSNFAQGFLGPKLNSN*APPPTKKNGTSLPPLGAHFF 738
            TVY P+ + +GL   GKH  + GLGG        F + F G K+    + P   K G +L  LGA  F
Sbjct:  165 TVYSPM-VEYGLNGPGKHLGVVGLGGLGHL-GVKFGKAF-GMKVTVISSSP--AKRGEALGRLGADAF 227          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.689e-45
Identity = 85/176 (48.30%), Postives = 112/176 (63.64%), Query Frame = 3
Query:   33 KSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCP-KMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDS--------MPLDAAAPLLCAGI 533
            ++P  +H  KA G AA D SGHL+P   SRR+TGD+DV +KVLYCGICH+DL  IKNEW  +++P+V GHEI G VTE                      C  CESC +  ENYC   ++ TY+S++ DGT T+GGYSD +V ++R++VRFP S        +PLD+ APLLCAG+
Sbjct:   13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGV 188          

HSP 2 Score: 27.7202 bits (60), Expect = 3.689e-45
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P+    GL E GKH  + GLGG
Sbjct:  189 TVYAPMR-QHGLCEAGKHVGVVGLGG 213          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 4.001e-44
Identity = 80/163 (49.08%), Postives = 103/163 (63.19%), Query Frame = 3
Query:   45 EEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            E     A GWAARD+SGHLSPF+F+RR   ++DV +KVLYCGICHTDL  IKNEWG +++P+VPGHEI G V                       +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y++R P S+P D AAPLLCAG+
Sbjct:    2 EHDGTAALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGV 164          

HSP 2 Score: 26.9498 bits (58), Expect = 4.001e-44
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P+ + +GL   GKH  + GLGG
Sbjct:  165 TVYSPM-VEYGLNAPGKHLGVVGLGG 189          
The following BLAST results are available for this feature:
BLAST of EY679884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
MTDH1_STYHU1.568e-4953.80Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH7_ARATH6.748e-4957.59Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH3_ARATH4.836e-4752.53Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CAD8B_ORYSJ2.606e-4648.02Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH2_ARATH4.094e-4652.83Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CAD8C_ORYSJ4.426e-4648.33Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
MTDH3_STYHU5.347e-4652.98Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CAD8D_ORYSJ2.173e-4550.31Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH7_ORYSJ3.689e-4548.30Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CAD8A_ORYSJ4.001e-4449.08Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-A12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679884 ID=EY679884; Name=EY679884; organism=Citrus sinensis; type=EST; length=887bp
ATAACATTGCCGTTCTCTCATCCAAAATGGCAAAGTCACCAGAAGAAGAA
CATCCAGTAAAGGCCTTCGGGTGGGCAGCCCGAGACAGCTCCGGCCATCT
CTCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGC
TGAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCGCCAACATCAAG
AATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGC
AGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAG
ATAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGCTGCGAGAGC
TGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTACAG
TTCCATTAACACTGACGGAACAATCACATTCGGAGGCTACTCTGATCACA
TGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTT
GATGCTGCTGCTCCTCTGCTTTGCGCCGGGATTAACCGTGTACGGTCCCA
TTGAAATAACTTTTGGACTAGCAGAACAAGGAAAGCATGGTAGGCTCTTT
GGGCTTGGCGGGGCTTGGTCCTGTCGCTGGTCAAATTTTGCCCAAGGCTT
TTTGGGGCCCAAATTGAACAGTAATTAAGCCCCCCCCCCAACAAAGAAAA
ACGGAACCTCTTTGCCCCCCTTGGGCGCCCATTTCTTTTTTAAATAGCCC
GGGACCCCGACCCAATTGAGGGGGGGCCCGGGGGCATATTGGAAGGTGTT
TATTTGGCACCGGGGGTCCCGCGTGGCCACCATTTTTTCCCATTTGCCCG
GGCCATAAAAAACCCCCGGGGCAAAGCTTTTTATAGG
back to top