EY679884

Overview
NameEY679884
Unique NameEY679884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.842e-38
Identity = 71/154 (46.10%), Postives = 100/154 (64.94%), Query Frame = 3
Query:   72 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            WAARD SG LSP+ F+RRE   EDV L++ +CG+C+ D+   +N +  S++P+VPGHEIAG VTE                     +C  CE+C + LEN+C K ++TY+S+++DGT+T GGYS H++ ++RY  + P   PL  AAPLLCAGI
Sbjct:   13 WAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGI 166          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.384e-38
Identity = 73/167 (43.71%), Postives = 103/167 (61.68%), Query Frame = 3
Query:   63 AFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGINRVRSH*NNF 563
            A GWAARD SG LSP+ ++ R TG EDV++KVLYCG+CH+DL  +KN+ G S +P+VPGHE+ G+V E                     +C +C  C  ++E YC K I   + + TDG  T GG+++ MV ++ ++V+ P+ M  + AAPLLCAGI  V S  N+F
Sbjct:   10 AIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGIT-VYSPFNHF 175          

HSP 2 Score: 24.6386 bits (52), Expect = 8.384e-38
Identity = 12/26 (46.15%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P    FG  + G  G + GLGG
Sbjct:  167 TVYSPFN-HFGFNQSGFRGGILGLGG 191          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.036e-37
Identity = 73/169 (43.20%), Postives = 100/169 (59.17%), Query Frame = 3
Query:   45 EEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFP------DSMPLDAAAPLLCAGI 533
            E+ P    GWAARD++G LSPF++  R  GDEDV +K+L+CGICH+DL+ IKNEWG + +P+VPGHEI G V E                      C +C +C +  ENYC  ++ ++++   DG    GG+S+  V N+RY+VR P         PLD  APLLCAG+
Sbjct:    2 EQQPKMVTGWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGV 170          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.427e-36
Identity = 64/155 (41.29%), Postives = 96/155 (61.94%), Query Frame = 3
Query:   69 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            G AA+D SG L+P+ ++ R TG +DV +K+ YCG+CH+DL  IKN+ G S +PMVPGHE+ GEV E                      C SC +C +++E YC K I +Y+ + TDG IT GG+++  V  ++++V+ P+ +  +  APLLCAG+
Sbjct:   13 GLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGV 167          

HSP 2 Score: 26.1794 bits (56), Expect = 4.427e-36
Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P+   FGL   G  G + GLGG
Sbjct:  168 TVYSPLS-HFGLKTPGLRGGILGLGG 192          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.767e-36
Identity = 68/155 (43.87%), Postives = 92/155 (59.35%), Query Frame = 3
Query:   69 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGV 165          

HSP 2 Score: 29.261 bits (64), Expect = 5.767e-36
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  535 TVYGPIEITFGLAEQGKHGRLFGLGG 612
            TVY P+ + FGL + G  G + GLGG
Sbjct:  166 TVYSPL-VRFGLKQSGLRGGILGLGG 190          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.495e-32
Identity = 66/154 (42.86%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   72 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            WAARD SG LSP   +RR    +DV L + +CG+C+ D+   +N+ G S +P+VPGHEIAG VT+                     +C  CE C    E  C K + T++ I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGI
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGI 167          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.846e-30
Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   72 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGI
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGI 161          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.846e-30
Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   72 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGI
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGI 161          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.259e-27
Identity = 64/161 (39.75%), Postives = 87/161 (54.04%), Query Frame = 3
Query:   57 VKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGT-ITFGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGI 533
            +KA G  A  +   L P + +RRE G  DV++++ YCG+CH+DL  +++EW  +++P VPGHEI G V                       +C  CE C + LENYC  M  TY+S   D    T GGYS  +V +ERY++R       L A APLLCAGI
Sbjct:    3 IKAVG--AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGI 161          
BLAST of EY679884 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  120 RRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-MILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGI 533
            RR     DV + + + GICH+D+ +  +EWG  +FPMVPGHEIAG VT                      +C  CE C N  E +C K ++ TY+S++ DG  T+GGYS  +V  +R++VR PD + +D A+PLLCAGI
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGI 164          
The following BLAST results are available for this feature:
BLAST of EY679884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CADH4_ORYSJ1.842e-3846.10Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH2_TOBAC8.384e-3843.71Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH9_ORYSJ2.036e-3743.20Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH_MEDSA4.427e-3641.29Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_EUCBO5.767e-3643.87Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH7.495e-3242.86Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU1.846e-3041.94NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO1.846e-3041.94NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
YAHK_ECOLI3.259e-2739.75Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADHA_BACSU4.256e-2741.73Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-A12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679884 ID=EY679884; Name=EY679884; organism=Citrus sinensis; type=EST; length=887bp
ATAACATTGCCGTTCTCTCATCCAAAATGGCAAAGTCACCAGAAGAAGAA
CATCCAGTAAAGGCCTTCGGGTGGGCAGCCCGAGACAGCTCCGGCCATCT
CTCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGC
TGAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCGCCAACATCAAG
AATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGC
AGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAG
ATAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGCTGCGAGAGC
TGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTACAG
TTCCATTAACACTGACGGAACAATCACATTCGGAGGCTACTCTGATCACA
TGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTT
GATGCTGCTGCTCCTCTGCTTTGCGCCGGGATTAACCGTGTACGGTCCCA
TTGAAATAACTTTTGGACTAGCAGAACAAGGAAAGCATGGTAGGCTCTTT
GGGCTTGGCGGGGCTTGGTCCTGTCGCTGGTCAAATTTTGCCCAAGGCTT
TTTGGGGCCCAAATTGAACAGTAATTAAGCCCCCCCCCCAACAAAGAAAA
ACGGAACCTCTTTGCCCCCCTTGGGCGCCCATTTCTTTTTTAAATAGCCC
GGGACCCCGACCCAATTGAGGGGGGGCCCGGGGGCATATTGGAAGGTGTT
TATTTGGCACCGGGGGTCCCGCGTGGCCACCATTTTTTCCCATTTGCCCG
GGCCATAAAAAACCCCCGGGGCAAAGCTTTTTATAGG
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