EY679883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_CELJU (Serine hydroxymethyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.271e-32 Identity = 76/190 (40.00%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 47 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSKIAKLRHDVEEYAKQFP 613 + E+K+N AVFPG QGGP H I A++ K+A TPEYK YQ+QV+ N A T +E G ++VSGGTENHL+LV+L K G ++ L HI NKN VP D S V GIR+GTPA+T+RGF E + ++ + + D A ++ N + I +++ V K+FP Sbjct: 247 EIEKKLNSAVFPGGQGGPLMHVIAAKAISFKEAMTPEYKDYQQQVVKNAKAMAATFIERGIKIVSGGTENHLMLVDLIGKPYSGKDADEALGKAHITVNKNAVPNDPRSPFVTSGIRVGTPAITTRGFKEAECIQLTNW-------------------ICDIFAALEAGNADAVIEQVKTRVASLCKEFP 417
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_POLSJ (Serine hydroxymethyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32 Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 2 Query: 47 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 439 ++E+ IN A+FPGLQGGP H I AVA K+A +PE+K YQ+QVL+N A+TL + G +VSG TE+HL+LV+L+ K I G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF +E+ Sbjct: 244 EHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALSPEFKTYQQQVLTNARIVAETLTQRGLRIVSGRTESHLMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEE 375
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_MOOTA (Serine hydroxymethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32 Identity = 71/144 (49.31%), Postives = 93/144 (64.58%), Query Frame = 2 Query: 47 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 475 +Y I++AVFPG+QGGP H I AVALK+A PE+K YQEQ+++N A L+ G+ LVSGGT+NHL+LV+L+NK I G E +L +V I NKN +P D V GIR+GT ALTSRG + +VA D A+ Sbjct: 243 EYARDIDKAVFPGVQGGPLMHVIAAKAVALKEAMLPEFKRYQEQIVTNARTLADALMGYGFNLVSGGTDNHLMLVDLRNKNITGREAEDILASVQITVNKNAIPFDPQKPSVTSGIRLGTAALTSRGMDADAMVQVARAIDLAL 386
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_ORITB (Serine hydroxymethyltransferase OS=Orientia tsutsugamushi (strain Boryong) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.286e-32 Identity = 77/188 (40.96%), Postives = 107/188 (56.91%), Query Frame = 2 Query: 56 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA-YFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSKIAKLRHDVEEYAKQFP 613 +KIN AVFPG+QGGP H I A+A +A P+YK Y QV+ N A+ L + GY +++GGT+NH++LV+L+ K I G E +L+A I NK +P D S + GIR+GTPA T+RGF E +F V Y D +A+ IKS K + T + S I + +H V+E FP Sbjct: 239 KKINSAVFPGMQGGPLMHVIAAKAIAFSEALMPQYKEYINQVMLNAKVLAKLLQDRGYNILTGGTDNHMLLVDLRGKNITGQEAEYLLDAAGITCNKQVMPFDTTSPTITSGIRLGTPACTTRGFKENEFITVGKYIADILDNIAI-IKS---AKKNEGITITEIEKSLNSVITRTKHHVQELCNCFP 422
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_GLUOX (Serine hydroxymethyltransferase OS=Gluconobacter oxydans GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.286e-32 Identity = 73/190 (38.42%), Postives = 109/190 (57.37%), Query Frame = 2 Query: 47 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSKIAKLRHDVEEYAKQFP 613 D +K+N AVFPGLQGGP H I G AVA +A + E+KAYQ++VL+N A L G+++V+GGT++HL+LV+L+ K++ G E +LE I ANKN +P D V GIR+G+PA T+RGF E +F +V D + A + N ++ A++ +V+ ++FP Sbjct: 256 DLAKKVNSAVFPGLQGGPLMHVIAGKAVAFGEALSDEFKAYQKRVLANARALADELQNRGFDIVTGGTDSHLILVDLRPKKVTGKLAEAILERAGITANKNAIPFDPEKPFVTSGIRLGSPAATARGFGEAEFREVGRMIDEVL------------------TAALEEDNAEAVTARVHEEVKALCRRFP 427
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.286e-32 Identity = 76/195 (38.97%), Postives = 109/195 (55.90%), Query Frame = 2 Query: 50 YEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSKIAKLRHDVEEYAKQFPTIGFEK 631 Y + +++AVFPGLQGGPHNHT +AVAL +A PE++ Y +++N + A+ LL G++LVSGGT+NHL+LV+L +K + G V + L+ I N NTVP D P GIR+GTPA+TSRG + ++A + D K E A Q ++ +V E K FPT G ++ Sbjct: 249 YAKALDKAVFPGLQGGPHNHTTAAIAVALLEAMQPEFRDYARNIVANAAVLAEELLARGFDLVSGGTDNHLILVDLTSKGVAGKPVARALDRAGIELNYNTVPFDPRKPFDPSGIRLGTPAVTSRGMGPAEMRQIAAWIDEVTTAVAKGDEEA-------LAAVEQ---------RVAGEVRELTKNFPTPGLDR 427
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_RHOFD (Serine hydroxymethyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32 Identity = 66/131 (50.38%), Postives = 91/131 (69.47%), Query Frame = 2 Query: 50 YEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 439 +E+ IN A+FPGLQGGP H I AVA K+A PE+K YQ+QVL+N A+TL+ G +VSG TE+H++LV+L++K I G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF +E+ Sbjct: 245 HEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLVSRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEE 375
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_SHISS (Serine hydroxymethyltransferase OS=Shigella sonnei (strain Ss046) GN=glyA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.243e-31 Identity = 72/145 (49.66%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 23 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 454 K G E Y +K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 242 KGGSEELY---KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_SHIFL (Serine hydroxymethyltransferase OS=Shigella flexneri GN=glyA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.243e-31 Identity = 72/145 (49.66%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 23 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 454 K G E Y +K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 242 KGGSEELY---KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of EY679883 vs. ExPASy Swiss-Prot
Match: GLYA_SHIF8 (Serine hydroxymethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glyA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.243e-31 Identity = 72/145 (49.66%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 23 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 454 K G E Y +K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 242 KGGSEELY---KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383 The following BLAST results are available for this feature:
BLAST of EY679883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679883 ID=EY679883; Name=EY679883; organism=Citrus sinensis; type=EST; length=873bpback to top |