FC871378

Overview
NameFC871378
Unique NameFC871378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C67_ARATH (Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 1
Query:  538 DGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLK 762
            DGL WYKD G H  GEFSMA++QAN+++EDQ Q+ESG L+ +     GTFVGVYDGHGGPE SR+I D++F  LK
Sbjct:   23 DGLTWYKDLGLHTFGEFSMAMIQANSVMEDQCQIESGPLTFNNPTVQGTFVGVYDGHGGPEASRFIADNIFPKLK 97          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C43_ORYSJ (Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584366 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.558e-19
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 1
Query:  538 DGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNL 768
            D LLW +D   H +GEFS AVVQAN++LED SQVE+G+ +        TF+GVYDGHGG E SR+I++HL  HL  L
Sbjct:   38 DLLLWSRDLVRHAAGEFSFAVVQANDVLEDHSQVETGAAA--------TFIGVYDGHGGAEASRFISNHLAAHLVRL 106          

HSP 2 Score: 30.8018 bits (68), Expect = 1.558e-19
Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 3
Query:  774 DQQSMSADVIRKAYQATEGGFMSLV 848
            ++ ++S D++R A+ ATE GF+SLV
Sbjct:  109 ERGTISEDIVRNAFSATEEGFLSLV 133          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C68_ARATH (Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.029e-19
Identity = 60/144 (41.67%), Postives = 73/144 (50.69%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRYVHSN----------SDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKEGLCLL 846
            M S L  +   C RP   RY   N           DS    D LLW ++   H  G+FS+AVVQAN ++ED SQVE+G+ +         FVGVYDGHGGPE SRYI+DHLF HL  + R  S      L       +EG   L
Sbjct:    1 MFSWLARMALFCLRPMR-RYGRMNRDDDDDDDHDGDSSSSGDSLLWSRELERHSFGDFSIAVVQANEVIEDHSQVETGNGAV--------FVGVYDGHGGPEASRYISDHLFSHLMRVSRERSCISEEALRAAFSATEEGFLTL 135          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C63_ARATH (Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 52/125 (41.60%), Postives = 71/125 (56.80%), Query Frame = 1
Query:  466 LLRACFRPRSDRYVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKEGLC 840
            +LRA  RP  +R + S +      DGLLW  +   H  G++S+AVVQAN+ LEDQSQV + S +T        +VGVYDGHGGPE SR++N HLF ++    R         + K  K+ +E  C
Sbjct:    1 MLRALARPL-ERCLGSRASG----DGLLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSSAT--------YVGVYDGHGGPEASRFVNRHLFPYMHKFAREHGGLSVDVIKKAFKETEEEFC 112          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C78_ORYSJ (Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16
Identity = 43/77 (55.84%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  529 GRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHL 759
            G  DGLLW+ +   H SGE+S+AV QAN  LEDQ QV +         P  TFVGVYDGHGGPE SR+I+  LF HL
Sbjct:   24 GGGDGLLWHAELKPHASGEYSIAVAQANAELEDQGQVVTS--------PAATFVGVYDGHGGPEASRFISSRLFPHL 92          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C36_ORYSJ (Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.520e-15
Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  445 MLSELMNLLRAC-----------FRPRSDRYVHSNSDSLGRQ--DGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLK 762
            ML  L+ LL AC            R  S     + +D    +  DGLLW++D     +GE S+AVVQ N++LEDQ +VESG           T +GV+DGH GP+ +R+  DHL  +L+
Sbjct:    1 MLGALLRLLSACGGVWPTSPAPPARSSSSSSAAAAADQAAAEGRDGLLWWRDLARCHAGELSVAVVQGNHVLEDQCRVESGPPPL-----AATCIGVFDGHAGPDAARFACDHLLPNLR 114          

HSP 2 Score: 30.0314 bits (66), Expect = 1.520e-15
Identity = 14/34 (41.18%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  747 LSTSQEFTSDQQSMSADVIRKAYQATEGGFMSLV 848
            L   +E  S  + ++AD IR A+ ATE GF+++V
Sbjct:  110 LPNLREAASGPEGVTADAIRDAFLATEEGFLAVV 143          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C61_ORYSJ (Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.260e-13
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 1
Query:  529 GRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLF 750
            G +D L W  +   H +GEFSMA  QAN ++EDQ+QV +         P  T VGVYDGHGGP+ SR++   LF
Sbjct:   15 GGRDELTWQAELTAHAAGEFSMAAAQANAVMEDQAQVMA--------SPGATLVGVYDGHGGPDASRFLRSRLF 80          

HSP 2 Score: 23.0978 bits (48), Expect = 6.260e-13
Identity = 11/30 (36.67%), Postives = 21/30 (70.00%), Query Frame = 3
Query:  762 EFTSDQQ-SMSADVIRKAYQATEGGFMSLV 848
            EF +++  ++ ADVIRKA+ A +  ++ L+
Sbjct:   85 EFAAERGGAVDADVIRKAFLAADEEYLQLL 114          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query:  538 DGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLK 762
            DG+LW  +   H +GEFSMA  QAN  +EDQ+QV +         P  T VGVYDGHGG + SR++   LF H++
Sbjct:   20 DGMLWQTELRPHAAGEFSMAAAQANLAMEDQAQVLA--------SPAATLVGVYDGHGGADASRFLRSRLFPHVQ 86          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query:  538 DGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLK 762
            DG+LW  +   H +GEFSMA  QAN  +EDQ+QV +         P  T VGVYDGHGG + SR++   LF H++
Sbjct:   20 DGMLWQTELRPHAAGEFSMAAAQANLAMEDQAQVLA--------SPAATLVGVYDGHGGADASRFLRSRLFPHVQ 86          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C29_ORYSJ (Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 1
Query:  538 DGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKE 831
            DGL+W      H SG++S+AV QAN  LEDQ+QV           P  T VGVYDGHGGPE +R++N  LF  ++     S       L K   + +E
Sbjct:   29 DGLVWDVALKAHASGDYSVAVAQANEALEDQAQVF--------VSPAATLVGVYDGHGGPEAARFVNKRLFSLIQEFAAQSGGISAEVLEKAFGETEE 118          
The following BLAST results are available for this feature:
BLAST of FC871378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2C67_ARATH3.236e-2162.67Probable protein phosphatase 2C 67 OS=Arabidopsis ... [more]
P2C43_ORYSJ1.558e-1955.84Probable protein phosphatase 2C 43 OS=Oryza sativa... [more]
P2C68_ARATH3.029e-1941.67Probable protein phosphatase 2C 68 OS=Arabidopsis ... [more]
P2C63_ARATH2.835e-1741.60Probable protein phosphatase 2C 63 OS=Arabidopsis ... [more]
P2C78_ORYSJ9.121e-1655.84Probable protein phosphatase 2C 78 OS=Oryza sativa... [more]
P2C36_ORYSJ1.520e-1537.82Probable protein phosphatase 2C 36 OS=Oryza sativa... [more]
P2C61_ORYSJ6.260e-1347.30Probable protein phosphatase 2C 61 OS=Oryza sativa... [more]
P2C34_ORYSJ2.746e-1246.67Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C34_ORYSI2.746e-1246.67Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C29_ORYSJ3.587e-1240.82Probable protein phosphatase 2C 29 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2CE02FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2CE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871378 ID=FC871378; Name=FC871378; organism=Citrus sinensis; type=EST; length=848bp
GAACTGGACCTTTGCTTTGCTGGCTTCAAGCTCTCCATTGTTGCTCCTTT
ATTGGTCTTGTCTGCTAAGCTTTTTACATAGAAAGACCCTTTTCAGTTTT
CATTTGTTTCATCCAATTCTGCACATAAATTTTCCGGGAGGAAAAAAAAA
AAGAGAAGCTCCTTTGTGTTGTTGGACTCAAAAACAAGTCGAACCCATCT
TCAGTTTTTCTCTCCTGATTTGATTGATCCATAGATCTAATGATTTGAAT
GATACCCACATGAAAGTTTGTCCTTTTTAGATCCCCCTTCTCTCTTGTTC
ATCAACCTTGAGATATTTAGTCAAACTAAGGAGTGTTTGAGAAGTAGAGA
AGCATATACATAACAGCTGGAATATTTGAGCAGTGTTGTTTAGAGAGGCT
ATTAGATGTGGAGAATTCCGAGGGTTGTCTGGATGAGATGAGGGATGTTA
TCGGAGTTAATGAACCTTTTGAGGGCCTGTTTTCGGCCAAGGTCCGATCG
ATATGTTCACTCGAATTCGGATTCTTTGGGTCGTCAAGATGGCTTATTGT
GGTACAAAGATAGTGGACATCATGTAAGTGGTGAGTTCTCAATGGCTGTA
GTTCAGGCCAATAATTTACTTGAGGATCAAAGCCAAGTGGAGTCAGGGAG
TCTGAGCACTCACGAGTTTGGGCCATATGGTACCTTTGTTGGTGTCTATG
ATGGTCATGGAGGACCTGAGACATCGCGCTATATCAACGATCACCTCTTT
CAACATCTCAAGAATTTACTTCGGACCAGCAGTCAATGTCAGCGGACGTG
ATTAGGAAAGCATATCAAGCAACAGAAGGAGGGTTTATGTCTCTTGTT
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