EY715974

Overview
NameEY715974
Unique NameEY715974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.065e-43
Identity = 78/138 (56.52%), Postives = 100/138 (72.46%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            NISGGHVNPAVTFGA VGG +SL+R +LYW+AQLLG+  A LLL+  T G     FAL+SGVG W+A++ + +MTF L+Y  YAT +DPK+G +GTIAP+A+GF+ GA++  GG FDG   N    F PAL  W W +
Sbjct:   82 NISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRH 219          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            NISGGHVNPA+TFGA +GG +SL+R + YW+AQLLG+ VA LLL+  T G     FAL+SGVG W+A++ +  MTF L+Y  YAT +DPK+G +GTIAP+A+GF+ GA++  GG FDG   N    F PAL  W W +
Sbjct:   83 NISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRH 220          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.877e-41
Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            ANISGGH+NPAVT G  VGGNI++L G  YWIAQLLGSTVACLLLK+VTNG       +++G+  +  +V +I++TF L+YTVYAT  DPKKGSLGTIAPIAIGFI GA+I   G F G S N   +F PA+
Sbjct:   75 ANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 206          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.612e-41
Identity = 82/134 (61.19%), Postives = 100/134 (74.63%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGS 449
            AN+SGGH+NPAVT G  VGGNI++L G+ YWIAQ LGSTVACLLLKFVTNG +     +++G+ A   +V +I++TF L+YTVYAT  DPKKGSLG IAPIAIGFI GA+I   G F G S N   +F PA+ S
Sbjct:   75 ANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 208          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.636e-41
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGS 449
            ANISGGH+NPAVT G  +GGNI+L+ G  YWIAQ LGS VACLLL FVTNG++     +S+G+GA   +V +I++TF L+YTVYAT  DPKKGSLGTIAPIAIGFI GA+I   G F G S N   +F PA+ S
Sbjct:   75 ANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVS 208          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.636e-41
Identity = 82/132 (62.12%), Postives = 98/132 (74.24%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            ANISGGH+NPAVT G  VGGNI++L G  YWIAQLLGSTVACLLLK+VTNG       +++G+     +V +I++TF L+YTVYAT  DPKKGSLGTIAPIAIGFI GA+I   G F G S N   +F PA+
Sbjct:   75 ANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 206          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 82/141 (58.16%), Postives = 103/141 (73.05%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL--GSWSWH 461
            GANISGGHVNPAVTFG  VGG I+++ G+ YWIAQLLGST AC LLK+VT G      ++++G+G+   +V +I++TF L+YTVYAT  DPKKGSLGTIAP+AIG I GA+I   G F G S N   +F PA+  G +S H
Sbjct:   74 GANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGH 214          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.924e-40
Identity = 76/138 (55.07%), Postives = 100/138 (72.46%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            N+SGGHVNPAVTF A +GG IS++R I YW+AQL+G+ +ACLLL+  TNG     F ++SGV   + ++ +I++TF L+Y VY+T +DPK+GS+G IAP+AIG I GA+I  GG FDG S N   AF PAL  W W N
Sbjct:   86 NVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSN 223          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.513e-40
Identity = 76/138 (55.07%), Postives = 97/138 (70.29%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            N+SGGHVNPAVTFGA VGG +SL+R +LYW AQLLG+  A LLL+  T G     FAL+SGVG  +A++ + +MTF  +Y  YAT +DPK+G LGTIAP+A+GF+ GA++  GG FDG   N    F PAL  W W +
Sbjct:   87 NVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRH 224          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.513e-40
Identity = 82/134 (61.19%), Postives = 100/134 (74.63%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGS 449
            ANISGGH+NPAVT G  VGGNI+++ G  YWIAQ LGS VACLLL FVTNG++     +++G+GA   +V +I++TF L+YTVYAT  DPKKGSLGTIAPIAIGFI GA+I   G F G S N   +F PA+ S
Sbjct:   75 ANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVS 208          
The following BLAST results are available for this feature:
BLAST of EY715974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
TIP31_MAIZE7.065e-4356.52Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP31_ORYSJ1.020e-4155.07Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP2_TOBAC3.877e-4162.12Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP_ANTMA6.612e-4161.19Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP23_ARATH8.636e-4161.94Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP1_TOBAC8.636e-4162.12Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP21_ARATH1.473e-4058.16Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP32_ARATH1.924e-4055.07Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP32_MAIZE2.513e-4055.07Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP22_ARATH2.513e-4061.19Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-H09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715974 ID=EY715974; Name=EY715974; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGCACGCTTTCTTCCTTTTCGTTGCTGTCGCCGTTGGCGCC
AACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGT
TGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGC
TTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGC
CAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGC
AATCGTTTTCAAGATCTTGATGACATTCAGACTACTGTACACAGTGTATG
CCACAACCCTGGACCCAAAAAAGGGAAGCTTGGGGACAATTGCGCCAATT
GCAATTGGTTTCATTGAAGGAGCCAGCATCTTCGGGGGCGGGGCGTTTGA
TGGCACTTCACGGAACCGACCACCGGCATTCCGGCCCGCTTTGGGGAGCT
GGAGCTGGCACAACAGTGGGCCACCGGAGTCCCGCCAATCCGTCGGTGAG
GGGCAATTGGCCTCCATTAAAACGCTTCTTATTTCCAATTCTGTGGGTCT
CATCCACGCATAGACATAAGCTTAGTATAATCACTGTATGTTTTGTAACA
CAACCAGGAAAAGAACGAAACCGACGGGGGCACATCTCACTCGAACACGA
CGAAAGCACAAACAAATCAGAAAATAAGACACACGAGAACGGACAGAAAG
GAACACTGTCACAGAAGAACAAGAGTAATAGAGACTCGCCCGACCACTCC
GCCCACGCCCCCATCCCCCGGCCGCGACCTTTGTCGCTCCTTCATCCGCA
GACCATGAGACACGGCGCGAGCGGGGGCAAGGTGATGGACGGACAACCAC
TGATCCGATAAGCCCGCCCACACCGC
back to top