EY715974

Overview
NameEY715974
Unique NameEY715974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            G ++SGGH+NPAVT G  V G+I+ LR +LY  AQLL S+ AC+LL+F++ G  T   AL  G+     +V ++++TF LL+  YA  LDP +  +  I P+  G I GA+   GG F G S N   +F PAL +  W N
Sbjct:   80 GFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTN 218          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.439e-27
Identity = 60/140 (42.86%), Postives = 88/140 (62.86%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            G ++SGGH+NPAVT G  V G+I+ LR +LY  AQLL S++AC+LL++++ G  T   AL +G+     +V ++++TF LL+  YA  LDP +  + TI P+  G I GA+   GG F G S N   +F PA+ +  W N
Sbjct:   82 GFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTN 220          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.439e-27
Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL--GSWSWH 461
            G ++SGGH+NPAVT      G+I+  R  LY  AQLL S++AC+LL+++T G  T    L SG+G    +V +I++TF LL+ VYAT LDP + S+    P+  G I GA+   GG F G S N   +F PAL  G W+ H
Sbjct:   76 GFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDP-RSSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATGVWTHH 215          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.523e-26
Identity = 62/138 (44.93%), Postives = 83/138 (60.14%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSW 458
            G +ISGGHVNPAVT    VGG+++L R  LY  AQ+L S+ AC LL+++T G  T   AL+ GVG    +V + + TF LL+ +YAT LDP+K  L    P+  G + GA+   G A  G S N   +F PA+ S  W
Sbjct:   73 GFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVW 209          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.523e-26
Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL--GSWSWH 461
            G ++SGGH+NPAVT    VGG+I+L R  LY  AQL GS++ACLLL+ +T G  T   AL+ GVG    +  + + TF LL  + AT LDP++ +     P+  G + GA+   GGA  G S N   +F PAL  G W+ H
Sbjct:   78 GFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHH 218          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            N+SGGHVNPAVTF   V G IS+   + YW +Q++ S +ACL+LK     Q    + ++  +  + A V + ++ F L+YTV+ T  DP++G    + PI IGF+ GA++   G F G S N   AF  A+   S+ N
Sbjct:   80 NVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKN 216          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 4.456e-21
Identity = 56/174 (32.18%), Postives = 93/174 (53.45%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLG--------TIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHNSGPPESRQSVGEGQLASIKTLLISNSV 545
            A++SGGHVNPAVTF   +GG+I++   I YW +Q+LGST ACL+L +++ GQ      ++  +  + A + + ++TF ++YTV+    DP+ G  G         +  + +G + GA +   G+  G S N   +F PA+ S  + N     +   VG    A +   L+  +V
Sbjct:   74 ADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVHVAG-DPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQALVFPTV 246          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 56/175 (32.00%), Postives = 89/175 (50.86%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYAT-TLDPK-KGSLG-------TIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHNSGPPESRQSVGEGQLASIKTLLISNSV 545
            A++SGGHVNPAVTF   +GG I +   + YW +QLLG+T ACL L   + G+      ++  +  +   V + ++TF L+YTV+     +P+ +G  G        +  +A+G  +GA +   GA  G S N   +F PA+ S  + N     +   VG    A +  ++   SV
Sbjct:   77 ADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFKNQAVYWAGPMVGAAVAALVYQIMACPSV 251          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.232e-15
Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + +I +T + +  ++AT  + + G LG++A +A+GF        G  + G   N   +F PA+
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAI 193          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + +I +T + +  ++AT  + + G LG++A +A+GF        G  + G   N   +F PA+
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAI 193          
The following BLAST results are available for this feature:
BLAST of EY715974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
TIP41_MAIZE1.868e-2743.57Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
TIP42_MAIZE2.439e-2742.86Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP41_ORYSJ2.439e-2744.68Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
TIP43_MAIZE3.523e-2644.93Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP42_ORYSJ3.523e-2643.97Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP51_ARATH2.000e-2139.13Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP51_ORYSJ4.456e-2132.18Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP51_MAIZE3.531e-1832.00Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
MIP_BOVIN6.232e-1536.57Lens fiber major intrinsic protein OS=Bos taurus G... [more]
MIP_SHEEP1.063e-1436.57Lens fiber major intrinsic protein OS=Ovis aries G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-H09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715974 ID=EY715974; Name=EY715974; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGCACGCTTTCTTCCTTTTCGTTGCTGTCGCCGTTGGCGCC
AACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGT
TGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGC
TTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGC
CAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGC
AATCGTTTTCAAGATCTTGATGACATTCAGACTACTGTACACAGTGTATG
CCACAACCCTGGACCCAAAAAAGGGAAGCTTGGGGACAATTGCGCCAATT
GCAATTGGTTTCATTGAAGGAGCCAGCATCTTCGGGGGCGGGGCGTTTGA
TGGCACTTCACGGAACCGACCACCGGCATTCCGGCCCGCTTTGGGGAGCT
GGAGCTGGCACAACAGTGGGCCACCGGAGTCCCGCCAATCCGTCGGTGAG
GGGCAATTGGCCTCCATTAAAACGCTTCTTATTTCCAATTCTGTGGGTCT
CATCCACGCATAGACATAAGCTTAGTATAATCACTGTATGTTTTGTAACA
CAACCAGGAAAAGAACGAAACCGACGGGGGCACATCTCACTCGAACACGA
CGAAAGCACAAACAAATCAGAAAATAAGACACACGAGAACGGACAGAAAG
GAACACTGTCACAGAAGAACAAGAGTAATAGAGACTCGCCCGACCACTCC
GCCCACGCCCCCATCCCCCGGCCGCGACCTTTGTCGCTCCTTCATCCGCA
GACCATGAGACACGGCGCGAGCGGGGGCAAGGTGATGGACGGACAACCAC
TGATCCGATAAGCCCGCCCACACCGC
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