EY715974

Overview
NameEY715974
Unique NameEY715974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.093e-14
Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            +ISG HVNPAVTF   VG  +SLLR I Y  AQLLG+     +L  VT        AL++   GV    A   +I +T + +  ++AT  + + G LG++A +A+GF        G  + G   N   +F PA+
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAI 193          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS---SGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL+   +GV    A   +I +T + +  ++AT  + + G LG++A +A+GF        G  + G   N   +F PA+
Sbjct:   61 HISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAI 193          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   +I +T + +  ++AT  + + G LG++A +A+GF        G  + G   N   +F PA+
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAI 193          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.005e-13
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R + Y +AQ LG+T    L+K       N     A  LS G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:   98 AGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSAT-DPKRNARDSHIPVLAPLPIGF 209          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.005e-13
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++    V    A   +I +T + +  ++AT  + + G LG++A +A+GF        G  + G   N   +F PA+ + ++ N
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA-LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTN 200          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 52/140 (37.14%), Postives = 74/140 (52.86%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQ----LLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            A ISGGH+NPAVTFG F+G  +SL+R +LY IAQ    + G+ +A    K   N        +S G     A+  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF             GT  N   +F PA+
Sbjct:  101 AGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAV 239          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL---GSWSWHN 464
            A ISGGH+NPAVTFG F+   +SL+R ILY +AQ LG+     L+K       N     A  L++G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF             GT  N   +   A+      +WHN
Sbjct:  104 AGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHN 252          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS---SGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL+   +GV    A   +I +T + +  ++AT  + + G +G++A +A+GF        G  + G   N   +F PA+ + ++ N
Sbjct:   59 HISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSN 198          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS---SGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL+   +GV    A   +I +T + +  ++AT  + + G +G++A +A+GF        G  + G   N   +F PA+ + ++ N
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSN 200          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R +LY  AQ LG+     L+K   +G        A  +S+G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:  103 AGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGF 214          
The following BLAST results are available for this feature:
BLAST of EY715974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
MIP_RABIT3.093e-1436.57Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
MIP_CAVPO1.175e-1335.82Lens fiber major intrinsic protein OS=Cavia porcel... [more]
MIP_CANFA1.175e-1335.82Lens fiber major intrinsic protein OS=Canis famili... [more]
PIP26_ARATH2.005e-1340.71Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
MIP_HUMAN2.005e-1334.04Lens fiber major intrinsic protein OS=Homo sapiens... [more]
PIP27_MAIZE2.618e-1337.14Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP21_ORYSJ2.618e-1335.33Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
MIP_RAT2.618e-1334.04Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE2.618e-1334.04Lens fiber major intrinsic protein OS=Mus musculus... [more]
PIP26_MAIZE3.420e-1339.82Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-H09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715974 ID=EY715974; Name=EY715974; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGCACGCTTTCTTCCTTTTCGTTGCTGTCGCCGTTGGCGCC
AACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGT
TGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGC
TTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGC
CAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGC
AATCGTTTTCAAGATCTTGATGACATTCAGACTACTGTACACAGTGTATG
CCACAACCCTGGACCCAAAAAAGGGAAGCTTGGGGACAATTGCGCCAATT
GCAATTGGTTTCATTGAAGGAGCCAGCATCTTCGGGGGCGGGGCGTTTGA
TGGCACTTCACGGAACCGACCACCGGCATTCCGGCCCGCTTTGGGGAGCT
GGAGCTGGCACAACAGTGGGCCACCGGAGTCCCGCCAATCCGTCGGTGAG
GGGCAATTGGCCTCCATTAAAACGCTTCTTATTTCCAATTCTGTGGGTCT
CATCCACGCATAGACATAAGCTTAGTATAATCACTGTATGTTTTGTAACA
CAACCAGGAAAAGAACGAAACCGACGGGGGCACATCTCACTCGAACACGA
CGAAAGCACAAACAAATCAGAAAATAAGACACACGAGAACGGACAGAAAG
GAACACTGTCACAGAAGAACAAGAGTAATAGAGACTCGCCCGACCACTCC
GCCCACGCCCCCATCCCCCGGCCGCGACCTTTGTCGCTCCTTCATCCGCA
GACCATGAGACACGGCGCGAGCGGGGGCAAGGTGATGGACGGACAACCAC
TGATCCGATAAGCCCGCCCACACCGC
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