EY715974

Overview
NameEY715974
Unique NameEY715974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG  +   ++L+R ++Y +AQ LG+     L+K   +   T     A  LS G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:   98 AGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGF 209          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R ILY +AQ LG+     L+K   +         A  L++G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:   98 AGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGF 209          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 46/134 (34.33%), Postives = 70/134 (52.24%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            ++SG H+NPAVTF   +G  +SL R I Y  AQLLG+     +L  VT        AL++   GV    A   +I +T + +  ++AT  + + G LG+++ +AIGF        G  + G S N   +F PA+
Sbjct:   61 HVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS-LAIGFSLTLGHLFGLYYTGASMNPARSFAPAV 193          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG  +   +S++R ++Y +AQ LG  V   ++K +     N     A  ++SG     A+  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:   94 AGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGF 205          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:  103 AGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGF 214          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:  104 AGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGF 215          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K   +         A  LS G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:  103 AGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSAT-DPKRNARDSHIPVLAPLPIGF 214          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.618e-13
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS+G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:   99 AGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYG--GGANELSAGYSKGTGLAAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGF 210          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.618e-13
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTS----AFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+      +K   +    +    A  L+ G      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:   97 AGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGF 208          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.618e-13
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 3
Query:   48 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGS----LGTIAPIAIGF 362
            A ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K   +         A +L+SG      +  +I+ TF L+YTV++ T DPK+ +    +  +AP+ IGF
Sbjct:  106 AGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGF 217          
The following BLAST results are available for this feature:
BLAST of EY715974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
PIP25_ARATH3.420e-1338.05Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ4.466e-1339.82Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
MIP_RANPI4.466e-1334.33Lens fiber major intrinsic protein OS=Rana pipiens... [more]
PIP26_ORYSJ5.833e-1338.05Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP24_MAIZE5.833e-1341.74Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE5.833e-1341.74Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ5.833e-1340.71Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE7.618e-1340.00Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP23_ARATH7.618e-1338.05Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP22_MAIZE7.618e-1339.82Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-H09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715974 ID=EY715974; Name=EY715974; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGCACGCTTTCTTCCTTTTCGTTGCTGTCGCCGTTGGCGCC
AACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGT
TGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGC
TTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGC
CAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGC
AATCGTTTTCAAGATCTTGATGACATTCAGACTACTGTACACAGTGTATG
CCACAACCCTGGACCCAAAAAAGGGAAGCTTGGGGACAATTGCGCCAATT
GCAATTGGTTTCATTGAAGGAGCCAGCATCTTCGGGGGCGGGGCGTTTGA
TGGCACTTCACGGAACCGACCACCGGCATTCCGGCCCGCTTTGGGGAGCT
GGAGCTGGCACAACAGTGGGCCACCGGAGTCCCGCCAATCCGTCGGTGAG
GGGCAATTGGCCTCCATTAAAACGCTTCTTATTTCCAATTCTGTGGGTCT
CATCCACGCATAGACATAAGCTTAGTATAATCACTGTATGTTTTGTAACA
CAACCAGGAAAAGAACGAAACCGACGGGGGCACATCTCACTCGAACACGA
CGAAAGCACAAACAAATCAGAAAATAAGACACACGAGAACGGACAGAAAG
GAACACTGTCACAGAAGAACAAGAGTAATAGAGACTCGCCCGACCACTCC
GCCCACGCCCCCATCCCCCGGCCGCGACCTTTGTCGCTCCTTCATCCGCA
GACCATGAGACACGGCGCGAGCGGGGGCAAGGTGATGGACGGACAACCAC
TGATCCGATAAGCCCGCCCACACCGC
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