EY715974

Overview
NameEY715974
Unique NameEY715974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 41/141 (29.08%), Postives = 73/141 (51.77%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ ++++TF+L++T++A+    +    G++A +AIGF           + G S N   +F PA+   +W N
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWEN 229          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIG 359
            +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+    ++     L+ GV +   +  +I+ T +L+  V ATT D ++  LG   P+AIG
Sbjct:   71 HISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIG 175          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 40/140 (28.57%), Postives = 71/140 (50.71%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPA--LGSWS 455
            ++SG H+NPAVT G  +  +IS+L+G  Y ++Q +G+     L+K  T         ++     + A   ++ + L+TF L++ V+    D ++  +   AP+AIG    A       + G S N   +F PA  +G+W+
Sbjct:   75 HVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHG-VCDNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWT 213          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 41/141 (29.08%), Postives = 72/141 (51.06%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS---SGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         ++     + A + ++ ++++TF+L++T++A+    +    G+IA +AIGF           + G S N   +F PA+   +W N
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWEN 229          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 37/134 (27.61%), Postives = 68/134 (50.75%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            ++SG H+NPAVT G  V  ++S+L+G  Y ++Q +G+     ++K  T  +         ++ G+     ++ + L+TF L++ V+    D ++  +   AP+AIG    A       + G S N   +F PA+
Sbjct:   74 HVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHG-VCDNRRTDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAV 206          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ---TTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            +ISG H+NPAVT    VG ++S+LR   Y  AQLLG+     LL  +T        +  ALS+   A  A+  ++ +T +L+  ++A+T D ++G       ++IGF        G  + G S N   +  PA+
Sbjct:   61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFAST-DERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAV 193          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ---TTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPAL 443
            ++SG H+NPAVT    VG ++S LR + Y  AQLLG+     LL  +T        +  AL++   A  A+  ++ +T +L+  ++A+T + +  ++GT A ++IGF        G  + G S N   +  PA+
Sbjct:   61 HVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVGTPA-LSIGFSVALGHLLGIHYTGCSMNPARSLAPAI 193          
The following BLAST results are available for this feature:
BLAST of EY715974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
AQP4_RAT4.180e-1129.08Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP1_CANFA4.180e-1137.74Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP_AEDAE5.460e-1128.57Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP4_HUMAN5.460e-1129.08Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP_ANOGA7.131e-1127.61Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP2_HUMAN7.131e-1132.09Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP2_BOVIN9.313e-1131.34Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-H09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715974 ID=EY715974; Name=EY715974; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGCACGCTTTCTTCCTTTTCGTTGCTGTCGCCGTTGGCGCC
AACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGT
TGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGC
TTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGC
CAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGC
AATCGTTTTCAAGATCTTGATGACATTCAGACTACTGTACACAGTGTATG
CCACAACCCTGGACCCAAAAAAGGGAAGCTTGGGGACAATTGCGCCAATT
GCAATTGGTTTCATTGAAGGAGCCAGCATCTTCGGGGGCGGGGCGTTTGA
TGGCACTTCACGGAACCGACCACCGGCATTCCGGCCCGCTTTGGGGAGCT
GGAGCTGGCACAACAGTGGGCCACCGGAGTCCCGCCAATCCGTCGGTGAG
GGGCAATTGGCCTCCATTAAAACGCTTCTTATTTCCAATTCTGTGGGTCT
CATCCACGCATAGACATAAGCTTAGTATAATCACTGTATGTTTTGTAACA
CAACCAGGAAAAGAACGAAACCGACGGGGGCACATCTCACTCGAACACGA
CGAAAGCACAAACAAATCAGAAAATAAGACACACGAGAACGGACAGAAAG
GAACACTGTCACAGAAGAACAAGAGTAATAGAGACTCGCCCGACCACTCC
GCCCACGCCCCCATCCCCCGGCCGCGACCTTTGTCGCTCCTTCATCCGCA
GACCATGAGACACGGCGCGAGCGGGGGCAAGGTGATGGACGGACAACCAC
TGATCCGATAAGCCCGCCCACACCGC
back to top