EY715966

Overview
NameEY715966
Unique NameEY715966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY715966_ssr767 microsatellite EY715966_ssr767:767..778. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.093e-31
Identity = 51/89 (57.30%), Postives = 71/89 (79.78%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MST A++RLMRDFKR+++DPP G+S +P  +N++ WNAVI GP +TP++ GTF++ LQF E YPNKPP  +FV +MFHP +Y+ G +CL
Sbjct:    1 MSTTARRRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCL 89          

HSP 2 Score: 32.3426 bits (72), Expect = 3.093e-31
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 2
Query:  323 DILQNQWSPIFDVVAIL 373
            DILQN+WSP +DV AIL
Sbjct:   90 DILQNRWSPTYDVAAIL 106          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.093e-31
Identity = 52/89 (58.43%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MST A++RLMRDFKR++ DPPAG+S +P  +N+M WNAVI GP DTP++ GTF+L + F E YPNKPP  +F+ +MFHP +Y  G +CL
Sbjct:    1 MSTSARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCL 89          

HSP 2 Score: 32.3426 bits (72), Expect = 3.093e-31
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 2
Query:  323 DILQNQWSPIFDVVAIL 373
            DILQN+WSP +DV AIL
Sbjct:   90 DILQNRWSPTYDVAAIL 106          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.093e-31
Identity = 52/89 (58.43%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MST A++RLMRDFKR++ DPPAG+S +P  +N+M WNAVI GP DTP++ GTF+L + F E YPNKPP  +F+ +MFHP +Y  G +CL
Sbjct:    1 MSTSARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCL 89          

HSP 2 Score: 32.3426 bits (72), Expect = 3.093e-31
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 2
Query:  323 DILQNQWSPIFDVVAIL 373
            DILQN+WSP +DV AIL
Sbjct:   90 DILQNRWSPTYDVAAIL 106          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.325e-29
Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MSTPA++RLMRDFKR+++DPP+G+S +P  +N+M WNAVI GP DTP++ GTF+L L F E YPNKPP  +F+  MFHP +YA G +CL
Sbjct:    1 MSTPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCL 89          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.951e-29
Identity = 54/89 (60.67%), Postives = 72/89 (80.90%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MST A++RLMRDFKR++ DPPAG+S +P  +N+M WNAVI GP DTP++ GTF+L +QF E YPNKPP  +F+ +MFHP +YA+G +CL
Sbjct:    1 MSTAARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCL 89          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.951e-29
Identity = 54/89 (60.67%), Postives = 72/89 (80.90%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MSTPA++RLMRDFKR++ D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F EDYPNKPP  +F+  MFHP +YA+G ICL
Sbjct:    1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICL 89          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.034e-29
Identity = 54/89 (60.67%), Postives = 70/89 (78.65%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MST A++RLMRDFKR++ DPPAG+S +P  +N+M WNAVI GP DTP++ GTF+L +QF E YPNKPP  +F+  MFHP +YA G +CL
Sbjct:    1 MSTAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCL 89          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.575e-29
Identity = 53/89 (59.55%), Postives = 72/89 (80.90%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MSTPA++RLMRDFKR++ D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP  +F+  MFHP +YA+G ICL
Sbjct:    1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICL 89          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.587e-29
Identity = 53/89 (59.55%), Postives = 72/89 (80.90%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MSTPA++RLMRDFKR++ D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP  +F+  MFHP +YA+G ICL
Sbjct:    1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICL 89          
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.587e-29
Identity = 53/89 (59.55%), Postives = 72/89 (80.90%), Query Frame = 1
Query:   55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321
            MSTPA++RLMRDFKR++ D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP  +F+  MFHP +YA+G ICL
Sbjct:    1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICL 89          
The following BLAST results are available for this feature:
BLAST of EY715966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
UBC2_YARLI3.093e-3157.30Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_EMENI3.093e-3158.43Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_ASPFU3.093e-3158.43Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_CANAL1.325e-2960.67Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBC2_TRIHA2.951e-2960.67Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma h... [more]
UBC2_CANGA2.951e-2960.67Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_NECHA5.034e-2960.67Ubiquitin-conjugating enzyme E2 2 OS=Nectria haema... [more]
UBC2_KLULA6.575e-2959.55Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBC2_YEAST8.587e-2959.55Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_ASHGO8.587e-2959.55Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-H01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715966 ID=EY715966; Name=EY715966; organism=Citrus sinensis; type=EST; length=948bp
CTTTTCTCTAGAACTTTCCTCTCTCGTTCTCTCTCTGTAGAACACGACGT
CGCCATGTCAACACCGGCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCC
TCCGGCGAGATCCACCCGCCGGCATCAGCGGTGCCCCTCAAGACAACAAC
ATCATGTTGTGGAACGCCGTTATTTTTGGGCCCGATGATACTCCCTGGGA
CGGAGGTACGTTCAAGTTGACTCTACAATTCACAGAGGATTATCCAAATA
AACCCCCAACAGGTCGTTTCGTCATCCGGATGTTTCATCCCTATATCTAT
GCAGATGGAAGTATTTGTTTGGGATATATTGCAAAATCAGTGGAGTCCTA
TATTTGATGTTGTAGCTATACTGGACCTGTATTCGGTCGCTGGTGTGGGA
TCCGGGTGAGATTTTTCCTGCTCACTCCGAAGACGACTCGGGTGTTGCTT
GATGCTAAGCGAAATAATAGACCAAAGAGTCGGGAAATTCTGGAACAAAA
ATAGATAAGCGGAGTATAAGGCAGAGACAGAAGGGGGGGTGCGCCGCGCA
GAGTAATGAGGAAATGGTCGGGGGGAGACTTTGTGTTACTTCAACGGGCG
GCCCTCACAACGGCCCGAGAGAGGGGGGGTGGGGAATTATGTTCGGTAGG
TGTGGGGGGTTCGGAGGGGGAGGGGCGCGGGGGGTCGCGAGACGCGGGAG
AAAACGAGAACAGGGGGGGAGGGGAGGAAGACGGGATAGAACATAGCGGG
GGGGGAAGTATAGGCCGGGAGGGAGGGAAGGATAAAGGGGAGGTGGGAGG
GGGAAGGGAGGATAGAAGAGGGGGAAGCGGAGAAGGAGAAGAAGGAGGAG
GGGAGGGGAGANAGGGGGGAGGGGATGAGTGGGACGGAGGGATGGAGGAG
GGAGGAGAGAGGGAGAGAGAGGGTGATGGAAGGAAAGCGAGGTGCCTG
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