FC871349

Overview
NameFC871349
Unique NameFC871349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: CE004_MACFA (Uncharacterized protein C5orf4 homolog OS=Macaca fascicularis GN=QccE-20373 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 54/211 (25.59%), Postives = 90/211 (42.65%), Query Frame = 2
Query:   50 VPILVYWLYSGLYVVLGSFDK---LDNYRLHSRIDEDEKNLVSKGDVVKGVLLQQVFQAIVAILLFAVTGNGAGAEANQQSSPIA-IARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGNLFHVFFKNNTAYHDIHHQLYGSKY 670
            VP L +W ++GL +V+ +  K   +  YR+    +E   + V     ++ VL  Q   +   ++         G    ++         +  I  L+ +   Y+ HR +HH  F Y+ IH  HH    P    +LY HPIE ++++ +   +  LV G        +FS A I T   HCG       +H+ F  +  +HD HH  +   Y
Sbjct:   86 VPCLFFWSFNGLLLVVDTTGKPNFISRYRIQVGKNEPV-DPVKLRQSIRTVLFNQCMVSFPMVVFLYPFLKWWGDPCRRELPTFHWFLLELAIFTLIEEVLFYYSHRLLHHPTF-YKKIHKKHHEWTAPIGVISLYAHPIEHVVSNMLPAIVGPLVMGSHLSSITMWFSLALIITTISHCG-------YHLPFLPSPEFHDYHHLKFNQCY 287          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: CH25H_DANRE (Cholesterol 25-hydroxylase-like protein OS=Danio rerio GN=ch25h PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 42/140 (30.00%), Postives = 68/140 (48.57%), Query Frame = 2
Query:  317 AMLVMDTWQYFMHRYMHHN-KFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIG--GALSFLVSGMSPRVSIFFFSFATIKTVDDHCGL---WLPGNLFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            A L++  +QYF+   +HH   +LYR  H +HH+    +A    Y+   E L   ++G   A++ ++ G+ P   + F       +V+DHCG    W    L          +HD+HHQ + S Y    P+F  WD++ GT
Sbjct:  114 ACLLLFDFQYFVWHLLHHKVPWLYRTFHKVHHKYTSTFALATEYSGAWETL---SLGFFAAVNPMLLGVHPMTEMLFHMLNMWLSVEDHCGYDLPWATHRLMPFGLYGGAPHHDVHHQKFKSNY---APYFTHWDKLFGT 247          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ER25B_DICDI (Putative C-4 methylsterol oxidase DDB_G0269788 OS=Dictyostelium discoideum GN=DDB_G0269788 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 62/232 (26.72%), Postives = 103/232 (44.40%), Query Frame = 2
Query:   41 GTFVPILVYWLYSGLYVVLGSFDK-LDNYRLHSRIDEDEKNLVSKGDVVKGVLLQQVFQAIVAILLF--AVTGNGAGAEANQQSSPIAIARQFVIA--MLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            GTF+   V++  S +   L  F   L  Y++      + K   ++ + +  VL+  +F  +  + +F  A+   G  A A   S P  I   F IA   L+ D + Y++HR +HH  F Y+HIH +HH    P+   A Y HP+E ++   +G  +   +          +      +TV+ H G   P N   +  F   + +HD HH+ +   Y+     F   D+I GT
Sbjct:   29 GTFIAHEVFYFGSFIPFFLCDFMPFLQKYKIQPTKKNEWK---TQFNCIFKVLMTHIFVQLPMMYIFDPAIKAIGLSARAPLPSIPYLI---FTIACCFLIEDFYFYWVHRALHHG-FWYKHIHKVHHDHAAPFGMTAEYAHPLETVILG-VGTVIGPFLFSRDLFTLWVWLGTRLFQTVECHSGYDFPWNPTKLIPFWGGSHFHDFHHETFVGNYSST---FTYLDKIFGT 249          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG3_LEPMC (C-5 sterol desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.957e-11
Identity = 66/229 (28.82%), Postives = 100/229 (43.67%), Query Frame = 2
Query:   56 ILVYWLYSGLYVVLGSFDKLD----NYRLHS-RIDEDEKNLVSKGDVVKGVLLQQVFQAIVA--ILLFAVTGNGAGAEANQQSSPIAIARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGNLFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTY 721
            + VY+L++GL  +L  FDK       Y  H  +++  + N+      +  +     F A V     L+  T  G G   +    P  IA          D   Y++HR +HH   +Y+HIH  HH+ ++P  F +   HPI+G           FL   +S   S+ FF F  I TV  H G +   +       N  A H +HH  +   YN+ Q F  +WDR+ G+Y
Sbjct:   98 VCVYYLFAGLSYLL-VFDKATFNHPRYLKHQIKLEMKQANIAFP---IMAIFTVPWFLAEVRGYSKLYDTTEKGPGRWYDYLQIPFFIA--------FTDLCIYWIHRGLHH-PMVYKHIHKPHHKWIMPTPFASHAFHPIDGYAQGLPYYIFPFLFP-LSKIASVAFFVFVNIWTVLIHDGEYAHNSP----IINGAACHTMHHLYF--NYNYGQ-FTTLWDRLGGSY 305          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_CANAL (C-4 methylsterol oxidase OS=Candida albicans GN=ERG25 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 2
Query:  305 QFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLL--NDTIGGALSF-LVSGMSPRVSI-FFFSFATIKTVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            Q+ +  ++ DTW Y+ HR +H+  F Y++IH  HHR   P+   A Y HP+E  L    T+G  + + L++G     ++  +      + VD H G   P +L +   F     +HD HH  +   Y+ +   F  WD IL T
Sbjct:  144 QWAVFFVLEDTWHYWFHRGLHYGVF-YKYIHKQHHRYAAPFGLAAEYAHPVEVALLGLGTVGIPIVWCLITGNLHLFTVSIWIILRLFQAVDAHSGYEFPWSLHNFLPFWAGADHHDEHHHYFIGGYSSS---FRWWDFILDT 282          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: C2511_DANRE (Cholesterol 25-hydroxylase-like protein 1, member 1 OS=Danio rerio GN=ch25hl1.1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11
Identity = 44/148 (29.73%), Postives = 71/148 (47.97%), Query Frame = 2
Query:  317 AMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWL---PGNLFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMPLSLEKRPD 751
            A+LV DT  +  H   H N  LYR +H++HH  + P+++   +   +E L+       +  ++    P        ++   +V+DH G  L   PG+L           HD+HHQ   S  NFA PFF  WD+I GT + + L ++ +
Sbjct:  133 ALLVFDTQYFLWHMVHHKNPHLYRWVHAIHHDYISPFSWSTQHLSGVE-LMTVGFWSNIDPILLKCHPLTVWTLTVYSIWMSVEDHIGYDLPFSPGHLVPFGLLGGAMAHDMHHQKPSS--NFA-PFFSHWDKIFGTAITVKLTQKSE 276          
The following BLAST results are available for this feature:
BLAST of FC871349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CE004_MACFA1.201e-1225.59Uncharacterized protein C5orf4 homolog OS=Macaca f... [more]
CH25H_DANRE2.675e-1230.00Cholesterol 25-hydroxylase-like protein OS=Danio r... [more]
ER25B_DICDI4.562e-1226.72Putative C-4 methylsterol oxidase DDB_G0269788 OS=... [more]
ERG3_LEPMC2.957e-1128.82C-5 sterol desaturase OS=Leptosphaeria maculans GN... [more]
ERG25_CANAL5.044e-1130.77C-4 methylsterol oxidase OS=Candida albicans GN=ER... [more]
C2511_DANRE5.044e-1129.73Cholesterol 25-hydroxylase-like protein 1, member ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2CB03FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2CB03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871349 ID=FC871349; Name=FC871349; organism=Citrus sinensis; type=EST; length=830bp
CGTCAACACGATGGCGTTTACGATTTCCGACGAATTGTTGGGCACTTTCG
TCCCAATTTTAGTCTATTGGTTGTATTCAGGATTATACGTCGTTCTTGGA
TCTTTTGATAAGCTTGATAATTATAGATTGCATTCGAGAATTGACGAGGA
CGAGAAAAATTTGGTCTCTAAGGGCGATGTCGTTAAAGGCGTTCTCCTTC
AGCAAGTTTTTCAGGCTATTGTTGCAATTCTCTTGTTTGCGGTGACAGGA
AATGGTGCTGGGGCAGAAGCCAATCAACAGTCTTCTCCAATTGCTATAGC
TCGGCAGTTTGTTATAGCAATGTTGGTTATGGATACATGGCAGTATTTTA
TGCATAGGTACATGCACCACAACAAGTTTTTGTATCGACACATCCATTCT
CTACATCACCGCCTTGTTGTCCCCTATGCATTTGGAGCTTTGTACAATCA
CCCCATTGAGGGGCTTCTTAATGACACAATTGGCGGTGCCTTATCTTTTC
TCGTTTCCGGTATGTCTCCCCGAGTCTCCATCTTCTTCTTTTCCTTTGCC
ACCATCAAAACAGTGGATGACCACTGTGGATTATGGCTTCCTGGAAACCT
CTTCCACGTGTTCTTCAAAAACAACACTGCCTATCATGATATCCACCATC
AACTTTATGGGAGCAAATACAACTTTGCACAACCATTCTTCGTGATGTGG
GATAGAATTCTTGGAACCTATATGCCCCTATCACTTGAGAAGAGACCAGA
TGGTGGCTTTGAAGCGCTGGCTACAAAGGATTACAAGCAGACGAAAGATT
ACAAGGACAACTGATTATACGTTAGGACCA
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