FC871312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL1M_ARATH (RING-H2 finger protein ATL1M OS=Arabidopsis thaliana GN=ATL1M PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 27/46 (58.70%), Postives = 30/46 (65.22%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 G EC VCLS DG+ R L C H FH CIDMW +SHS CP+CR Sbjct: 117 GLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 1 Query: 289 SKANEGTE-----MASGLKYRKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 S +N+G + M + Y +E ++ +G EC +CLS F GE +R L C H FH CID WL+ H CP CR Sbjct: 103 SSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 177
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 G EC +CL+ F D E +R + C H+FHASCID+WL S S CP+CR Sbjct: 125 GVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL1P_ARATH (RING-H2 finger protein ATL1P OS=Arabidopsis thaliana GN=ATL1P PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 27/46 (58.70%), Postives = 30/46 (65.22%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 G EC +CLS G+ R L C HSFH CIDMW +SHS CPICR Sbjct: 124 GLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICR 169
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL1L_ARATH (RING-H2 finger protein ATL1L OS=Arabidopsis thaliana GN=ATL1L PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 1 Query: 280 GVVSKANEGTEMASGLKYRKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 GV KA + + S Y E ++ + TEC +CLS F E V+ L C H FH CID WL SHS+CP CR Sbjct: 104 GVKRKALKSFQTVS---YSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL1F_ARATH (RING-H2 finger protein ATL1F OS=Arabidopsis thaliana GN=ATL1F PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 1 Query: 349 VKDVGTE-CPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 VKD GT+ C +CL+ F D + +R +S C HSFH CID+W + H CP+CR Sbjct: 146 VKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCR 196
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 1 Query: 349 VKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 +K TEC +CL F +GE VR L C H FH CID WL SHS+CP CR Sbjct: 106 LKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 G EC +CLS F D E +R + C H+FHA+CID+WL S S CP+CR Sbjct: 120 GVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL2A_ARATH (RING-H2 finger protein ATL2A OS=Arabidopsis thaliana GN=ATL2A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 364 TECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 TEC +CL+ FADGE +R L C HSFH CID WL S S+CP CR Sbjct: 100 TECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
BLAST of FC871312 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 27/58 (46.55%), Postives = 34/58 (58.62%), Query Frame = 1 Query: 325 LKYRKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 + Y E ++ +G EC +CLS F GE +R L C H FH CID WL+ H CP CR Sbjct: 121 VSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178 The following BLAST results are available for this feature:
BLAST of FC871312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871312 ID=FC871312; Name=FC871312; organism=Citrus sinensis; type=EST; length=718bpback to top |