FC871310

Overview
NameFC871310
Unique NameFC871310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 9.436e-32
Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 504
            S S+RAGLQFPVGR+ R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K  K+
Sbjct:   24 SSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_NEUCR (Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.610e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   29 SHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 131
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_MAGGR (Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.610e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   28 SHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 130
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_GIBZE (Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.610e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   30 SHSARAGLQFPCGRVKRFLKQNTQQKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAYGGVLPHINRALLLK 132
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_CHAGB (Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.610e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   29 SHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 131
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_NEOFI (Histone H2A.Z OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=htz1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_MONAN (Histone H2A.Z OS=Monascus anka GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   24 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 126
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_EMENI (Histone H2A.Z OS=Emericella nidulans GN=htz1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPOR (Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
[Close]
BLAST of FC871310 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPNC (Histone H2A.Z OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  184 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 492
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
The following BLAST results are available for this feature:
BLAST of FC871310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
H2AZ_YEAST9.436e-3265.42Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 ... [more]
H2AZ_NEUCR1.610e-3167.96Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 S... [more]
H2AZ_MAGGR1.610e-3167.96Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 S... [more]
H2AZ_GIBZE1.610e-3167.96Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1[more]
H2AZ_CHAGB1.610e-3167.96Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 ... [more]
H2AZ_NEOFI5.178e-3066.02Histone H2A.Z OS=Neosartorya fischeri (strain ATCC... [more]
H2AZ_MONAN5.178e-3066.02Histone H2A.Z OS=Monascus anka GN=HTZ1 PE=3 SV=1[more]
H2AZ_EMENI5.178e-3066.02Histone H2A.Z OS=Emericella nidulans GN=htz1 PE=3 ... [more]
H2AZ_ASPOR5.178e-3066.02Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 S... [more]
H2AZ_ASPNC5.178e-3066.02Histone H2A.Z OS=Aspergillus niger (strain CBS 513... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2BE07FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2BE07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871310 ID=FC871310; Name=FC871310; organism=Citrus sinensis; type=EST; length=737bp
TTTCTTTCTTCTCCTTTAATTTTCATCTCAGAAAAAATTAAAAATAATTA
AATAAATAATTAATTAATTTAAAAGAAGCTGTAGCAATTAGGCGGGAAAA
TGTCGGGCAAAGGAGCCAAAGGACTGATAACAGGCAAAACCACCATTAAC
AACAACAAGGATAAGGACAAGAAGAAACCCGTCTCCCGTTCTTCTCGTGC
TGGTCTTCAGTTCCCAGTGGGAAGGGTCCATCGTCTACTAAAGGAAAGGG
CTGCTGCTCACGGAAGGGTTGGCGCAACAGCTGCTGTTTATACAGCAGCC
ATTTTGGAATATCTAACTGCCGAAGTGTTGGAGTTGGCAGGGAATGCTAG
CAAGGATTTGAAGGTCAAACGTATTACTCCAAGGCATTTGCAGCTTGCTA
TCCGAGGAGATGAAGAACTTGACACTCTCATTAAAGGAACCATAGCCGGT
GGAGGAGTTATTCCTCATATCCACAAGTCCCTCATCAATAAATCCTCCAA
AGAGTAGTTCGTGACACCGTCATCCTCTCGGCTTTGTTTATGTGTGTACT
TTTAGCTGTGCTGAAATATCTAAATGAGAAATGATGCCAAAGATGTGTTA
ATGCTAGGAATCTGCATTCTTCAATCCTCATTTCATGCAGCGACGAATTA
TGGTGCTTGTTTTTTCCCATGTTGGTATTGAACTGTTACTGTTTAATTTT
TAAATAATTCTAAAAAAAAAAAAAAAAAAAAAAAAAA
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