DY257165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.933e-42 Identity = 83/177 (46.89%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175 HSP 2 Score: 35.8094 bits (81), Expect = 9.933e-42 Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 +F IYDV+++M+ C+NL GL VA L++ R Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER 220
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.933e-42 Identity = 83/177 (46.89%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175 HSP 2 Score: 35.8094 bits (81), Expect = 9.933e-42 Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 +F IYDV+++M+ C+NL GL VA L++ R Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER 220
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.863e-41 Identity = 82/177 (46.33%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWA NL+ + + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP Sbjct: 14 EVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175 HSP 2 Score: 36.5798 bits (83), Expect = 2.863e-41 Identity = 20/51 (39.22%), Postives = 30/51 (58.82%), Query Frame = 2 Query: 692 PELAQWPRTSFLTVLPVVFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 PE+ Q F +L + F IYDV+++M+ C+NL GL VA L++ R Sbjct: 175 PEVEQ----DFFEILRLFFP-VIYDVKYLMKSCKNLKGGLQEVAEQLELER 220
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.128e-41 Identity = 87/185 (47.03%), Postives = 122/185 (65.95%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF 725 R+VW++NL+ E LI +I+RYP +SMDTEFPG+V RP V S+ Y HY+ L++NVD+L +IQ+GL LSD GN P W+FNF F++ D +AP+SIELL GIDF++++E G++ FAEL++ SGLV E V+W+TFHS YDF YL+K +T+ LP+ E + Sbjct: 23 RDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDY--------HYQTLRANVDSLKIIQIGLALSDEEGNAPV------EACTWQFNFT-FNLQDDMYAPESIELLTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFY 192
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_XENTR (CCR4-NOT transcription complex subunit 7 OS=Xenopus tropicalis GN=cnot7 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.334e-41 Identity = 82/177 (46.33%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWA NL+ + + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP Sbjct: 14 EVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFVNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175 HSP 2 Score: 35.8094 bits (81), Expect = 6.334e-41 Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 +F IYDV+++M+ C+NL GL VA L++ R Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELKR 220
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.075e-40 Identity = 82/177 (46.33%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWA NLE E + I QV ++ +I+MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG++++ FAEL+M+SG+V E V W++FHS YDFGYL+KIL+ LP Sbjct: 14 EVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLP 175 HSP 2 Score: 35.4242 bits (80), Expect = 1.075e-40 Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 +F IYDV+++M+ C+NL GL VA L++ R Sbjct: 187 LFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELER 220
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: POP2_YEAST (Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae GN=POP2 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 5.168e-36 Identity = 79/181 (43.65%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLE 716 R+VW SNL SEF +I Q++ +Y +S+ TEF G + RP FR K HY+ +++NVD LN IQ+GL+LSD++GN PD N W+FNF +FD + + +S+ELLR GI+FE++ G+D F++L+M SGL+ ++SV+W+T+H+AYD G+L+ IL S+P+ E Sbjct: 161 RDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGT------FRS-KVDYHYQTMRANVDFLNPIQLGLSLSDANGNKPD-----NGPSTWQFNF-EFDPKKEIMSTESLELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKE 328
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_CAEEL (CCR4-NOT transcription complex subunit 7 OS=Caenorhabditis elegans GN=ccf-1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.991e-29 Identity = 89/274 (32.48%), Postives = 134/274 (48.91%), Query Frame = 3 Query: 180 VWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF*RSSRWFSVTPF----MTSNTLCGSVRTWTVGWTEWLGPWM*TGRSGSAPWPGSETLSTWPALTKFWDGFSPPNEPEKTCRGTYWNKRAPYL 989 V+ SN+E EF I ++ YP+++MDTEFPG+V P FR ++ ++ +V NV+ L LIQVG + + G LP G +W+FNF +F A D + +S+E+LR GIDF + G+ + F EL+ +SGL+ + ++W+TF S YDFGYL+K +T LP E F + T F + C S + G + + + R G GS+ L T K +K G WN+ AP + Sbjct: 26 VYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATP------LGTFRSKEDFNYQQVF-CNVNMLKLIQVGFAMVNDKGELPPTGD------VWQFNF-NFSFAEDMFSHESVEMLRQAGIDFTLLQNNGIPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSITLGDLPKE-ESTFFMCHKTLFPTSFDIKILLRTPNCASAK--LKGGLQEVADQLDVKRQGVRHQAGSDALLTAATFFKI----------KKQFFGDNWNQIAPLI 272
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.118e-22 Identity = 61/178 (34.27%), Postives = 94/178 (52.81%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAEL-MMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 R VW SN++ E +++ + R+P I+ DTE+PG+++R D S+ + Y+ +K NV+ LIQ G TL ++ G + GG +WE NF +F +D SIE LR G+D ++ R+EGVD + + + + V +VTF AYDF Y + IL LP Sbjct: 10 RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSS---------DECYRAMKGNVENTKLIQCGFTLFNAKGEI-----GG----VWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLP 169
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana GN=CAF1-5 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.902e-19 Identity = 61/179 (34.08%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNE---SVSWVTFHSAYDFGYLVKILTRRSLP 704 EVW N ++E I + I++DTEFPG + +D S Y+ +K NVD +LIQ+GLTL G G WE N DF+ + SI L+ G+D ++ REEG+ E M + NE + WVTF +YD YL+K LTR+ LP Sbjct: 4 EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDAS---------DEIRYRDMKFNVDNTHLIQLGLTL---------FGKGITK--TWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIG---IEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLP 159 HSP 2 Score: 28.8758 bits (63), Expect = 2.902e-19 Identity = 18/49 (36.73%), Postives = 25/49 (51.02%), Query Frame = 2 Query: 710 PRTS--FLTVLPVVFGNTIYDVQHIMRLCQNLDS--GLDRVARTLDVNR 844 P TS F + + G +YDV+ + LC L S GL R+A L + R Sbjct: 159 PETSKEFDETVQQLLGRFVYDVKKMAGLCSGLSSRFGLQRIADVLQMRR 207 The following BLAST results are available for this feature:
BLAST of DY257165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257165 ID=DY257165; Name=DY257165; organism=Citrus sinensis; type=EST; length=1323bpback to top |