DY257118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257118 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.258e-12 Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 389 DANAVIEKLNGTEFGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTFSSKEDAEAAISSLNNSLLEGQRIRVN 754 DA A + +NG + G+E+KVN P +Q + + SN + V+VG+L+ +T+E +K F+ G++ A+V + T KS G+GFV+F +K DAE AI + L G++IR N Sbjct: 60 DAAAALAAMNGRKILGKEVKVNWATTPSSQ------KKDTSNH----FHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 171
BLAST of DY257118 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.803e-12 Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 2 Query: 380 TVEDANAVIEKLNGTEFGGREIKVNITEKPLAQVDLSLLQAEDSNF--------------VDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTFSSKEDAEAAISSLNNSLLEGQRIRVNNA 760 +V + A ++ NG E GR ++VN P + D + S+F S +VYVGNL+ V L+ FSE+G+V+ A+V + +S GFGFVT+ S ++ + AI SL+ + L+G++IRV+ A Sbjct: 141 SVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRED-GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEA 280
BLAST of DY257118 vs. ExPASy Swiss-Prot
Match: ROC3_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.781e-12 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 380 TVEDANAVIEKLNGTEFGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTFSSKEDAEAAISSLNNSLLEGQRIRVNNA 760 +V++A +EK N + GR + VN ++ + + + ++VYVGNL V + L++ FSE G+V+ A+V T +S GFGFVT S ++ AIS+L+ LEG+ IRVN A Sbjct: 200 SVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERA------PRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320
BLAST of DY257118 vs. ExPASy Swiss-Prot
Match: ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.155e-12 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 380 TVEDANAVIEKLNGTEFGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTFSSKEDAEAAISSLNNSLLEGQRIRVNNA 760 TVE+A +E N + GR + VN + + + E S Y++YVGN+ + L++ FSE G+V+SA+V T +S GFGFVT +S+ + AI++L+ L+G+ IRVN A Sbjct: 186 TVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQS------YRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVA 306
BLAST of DY257118 vs. ExPASy Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.391e-11 Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 380 TVEDANAVIEKLNGTEFGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTFSSKEDAEAAISSLNNSLLEGQRIRVNNA 760 TVE+A+ +E + + GR + VN ++ + + TY++YVGN+ + L++ FSE G+V+SA+V + +S GFGFVT SS+ + AI++L+ L+G+ IRVN A Sbjct: 147 TVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERA------PRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAA 267
BLAST of DY257118 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.047e-11 Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 2 Query: 386 EDANAVIEKLNGTEFGGREIKVNITEKPLA-QVDLSLLQAEDSNFVDSTYK---VYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTFSSKEDAEAAISSLNNSLLEGQRIRV 751 EDAN +E++NG E G+ I V +K + Q +L + S Y+ +Y+ NL T+ E L+K FS G + SAKV G SK GFGFV FSS E+A A++ +N ++ + + V Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365 The following BLAST results are available for this feature:
BLAST of DY257118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257118 ID=DY257118; Name=DY257118; organism=Citrus sinensis; type=EST; length=1244bpback to top |