DY257108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257108 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 6.174e-26 Identity = 85/247 (34.41%), Postives = 113/247 (45.75%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT-RRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYG--GLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKI 908 EVW N E E I + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DFD SI L+ G++ ++ REEG+ F + ++WV F +YD YLVK LT + LP +EF ++ G ++DVK I C L GL R+A L + R VGK H AGSDS LT F K+ Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGFAK----------TWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKR-VGKAHHAGSDSELTARVFTKL 234
BLAST of DY257108 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.064e-25 Identity = 83/247 (33.60%), Postives = 113/247 (45.75%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT-RRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYG--GLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKI 908 EVW N E E + I + + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DF+ SI L+ G++ ++ EEG+ F + ++WV F +YD YLVK LT + LP +EF + G ++DVK I C L GL R+A L + R VGK H AGSDS LT F K+ Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGITK----------TWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKR-VGKAHHAGSDSELTARVFTKL 229
BLAST of DY257108 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.915e-25 Identity = 81/234 (34.62%), Postives = 115/234 (49.15%), Query Frame = 3 Query: 213 LISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYG--GLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKI 908 LI + Y FI++DTEFP + R + + Y + +VD LIQ+GLTL D +G + GG WE NF DF V DA SIE LR G+D + REEG+ F M +++WVTFH +YD YL+K T +LP + F + G ++YD+K + C+ L GL+ +A ++R VG H AGS++ LT F K+ Sbjct: 3 LIEDCLRSYRFIAIDTEFPSTL---------RETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI-----GGT----WEINFSDFGV-DDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLG-SVYDLKVMAGRCEGLSSRLGLETLAHEFGLNR-VGTAHHAGSNNELTAMVFAKV 215 The following BLAST results are available for this feature:
BLAST of DY257108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257108 ID=DY257108; Name=DY257108; organism=Citrus sinensis; type=EST; length=1300bpback to top |