DT214601

Overview
NameDT214601
Unique NameDT214601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6531 contig Csv1_Contig6531:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_STAAN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain N315) GN=odhB PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV T++GL VP +RD DKK  + I  E+  LA KA++  L   D   G+FT+TN GG FG      IIN  Q+ IL + S   R +  +  D  +    M + LS DHR+IDG     +LK  K  IENPE +LL
Sbjct:  284 DIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITN-GGIFGSMMSTPIINGNQAAILGMHSIITRPI-AIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL 420
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_STAAM (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=odhB PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV T++GL VP +RD DKK  + I  E+  LA KA++  L   D   G+FT+TN GG FG      IIN  Q+ IL + S   R +  +  D  +    M + LS DHR+IDG     +LK  K  IENPE +LL
Sbjct:  284 DIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITN-GGIFGSMMSTPIINGNQAAILGMHSIITRPI-AIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL 420
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_STAAC (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain COL) GN=odhB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV T++GL VP +RD DKK  + I  E+  LA KA++  L   D   G+FT+TN GG FG      IIN  Q+ IL + S   R +  +  D  +    M + LS DHR+IDG     +LK  K  IENPE +LL
Sbjct:  284 DIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITN-GGIFGSMMSTPIINGNQAAILGMHSIITRPI-AIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL 420
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_STAAB (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=odhB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV T++GL VP +RD DKK  + I  E+  LA KA++  L   D   G+FT+TN GG FG      IIN  Q+ IL + S   R +  +  D  +    M + LS DHR+IDG     +LK  K  IENPE +LL
Sbjct:  284 DIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITN-GGIFGSMMSTPIINGNQAAILGMHSIITRPI-AIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL 420
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_STAA8 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain NCTC 8325) GN=odhB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV T++GL VP +RD DKK  + I  E+  LA KA++  L   D   G+FT+TN GG FG      IIN  Q+ IL + S   R +  +  D  +    M + LS DHR+IDG     +LK  K  IENPE +LL
Sbjct:  284 DIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITN-GGIFGSMMSTPIINGNQAAILGMHSIITRPI-AIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL 420
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_STAA3 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain USA300) GN=odhB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV T++GL VP +RD DKK  + I  E+  LA KA++  L   D   G+FT+TN GG FG      IIN  Q+ IL + S   R +  +  D  +    M + LS DHR+IDG     +LK  K  IENPE +LL
Sbjct:  284 DIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITN-GGIFGSMMSTPIINGNQAAILGMHSIITRPI-AIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL 420
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_ECOLI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Escherichia coli (strain K12) GN=sucB PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            ++++AV T  GL  PV+RD D  G++ I +++++LA K +D  L  +D  GG FT+TN GG FG      IINPPQS IL + + + R +   G  Q +    M + LS DHR+IDG     +L   K  +E+P  +LL
Sbjct:  268 DVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITN-GGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNG--QVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 403
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_ECO57 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Escherichia coli O157:H7 GN=sucB PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = -2 
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            ++++AV T  GL  PV+RD D  G++ I +++++LA K +D  L  +D  GG FT+TN GG FG      IINPPQS IL + + + R +   G  Q +    M + LS DHR+IDG     +L   K  +E+P  +LL
Sbjct:  268 DVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITN-GGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNG--QVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 403
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_MYCCT (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=pdhC PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.212e-20
Identity = 57/146 (39.04%), Postives = 83/146 (56.85%), Query Frame = -2 
Query:  415 WADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENP 852
            +A+  I+   N+NI +AV T NGL VPVI+ AD   +  IA ++ +LA KAKD  L   +    TFTV+N G   G+     IIN P+S IL VG+  +  +   G  Q +F   M ++++CDHR+IDGA    +L   + Y+  P
Sbjct:  291 FANNKIQFMHNINIGIAVDTPNGLMVPVIKGADHLSVFEIAIKISELANKAKDGKLTRAEMTEATFTVSNFGS-VGLDYATPIINSPESAILGVGTMSQTPLYINGELQKRF--IMPLSMTCDHRIIDGADAGRFLIKVQDYLSKP 433
[Close]
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_BACST (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Bacillus stearothermophilus GN=pdhC PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 8.212e-20
Identity = 56/149 (37.58%), Postives = 89/149 (59.73%), Query Frame = -2 
Query:  400 EYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGS-AEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 843
            E I Q    NI +A  T+ GL VPVI+ AD+K +  +A+E+ +LA+KA+D  L P + +G + T+TN+G   G + F  +IN P+  IL +G  AEK +V      +   +  ++++LS DHR+IDGA   + L   K  + +PE +L+
Sbjct:  282 EEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGG-QWFTPVINHPEVAILGIGRIAEKPIV---RDGEIVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM 426
The following BLAST results are available for this feature:
BLAST of DT214601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ODO2_STAAN2.161e-2042.45Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAM2.161e-2042.45Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAC2.161e-2042.45Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAB2.161e-2042.45Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA82.161e-2042.45Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA32.161e-2042.45Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_ECOLI6.287e-2039.57Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_ECO576.287e-2039.57Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_MYCCT8.212e-2039.04Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_BACST8.212e-2037.58Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0006c_G07_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214601 ID=DT214601; Name=DT214601; organism=Citrus sinensis; type=EST; length=862bp
GTTGTTTCACACAACACTGGTAATTGGAAAATCCAAAAAATATATATAAA
TCAAATTATTACCCGCATGAAAGAGGCGATTACACTCTACTAAAATCATG
TTCATCACGTATGTAACCCAAAAATCCATTAAGGAAAGGTCGATAGCAGA
ACACCTTGTTGAACACCCTATCAAGGATGAGTATGAGTTTAAGGATTGGT
TTCATGCCTCGATCCCCTGCTTTTATTCCAAAAATTTTGCATAAAAGTGT
TTACCAATTGAAAAACAAAATCAAGATGTGCTCAGTGACACAACCATGCC
AATCTGATCCCAGGTGGAAGGGGTTGAACTGAAGCCCCCATCTAAACTGA
TACAGCTAGGAAAGAGCTTCTCAACTTAGAAAAAGAAGAGTTTGGCTTAT
AGCAACATGGACTCCGGATTCTCAATGTATCCTTTGAATGCTTTCAACCA
TTCAGCACCAATCGCACCATCTATTACGCGATGATCACAACTTAATGTTA
CCGACATGAAGGAAGAAAATTTGTACTGATCTGGACCCAAGCCAGGGACA
ACCCTTTTCTCAGCAGATCCAACTGCAAGAATGCCAGATTGAGGAGGATT
GATAATGGCACAGAATTGCTTGATGCCGAAGGGTCCTCCCAAATTGGTAA
CTGTGAATGTGCCTCCCTCATAATCTTGTGGTTTCAAGCTGTTGTCTTTG
GCTTTCTGGGCCAACTGTCTGACCTCTTCAGCAATTGTGGATAAGCCTTT
CTTGTCAGCATCCCTTATAACTGGGACATAAAGACCGTTTTCTGTCTGCA
CTGCTACATTAATATTCACATTCTTAAATTGTCGGATATATTCATCAGCC
CATGAACTATTG
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