DT214593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214593 vs. ExPASy Swiss-Prot
Match: PIN3B_ORYSJ (Putative auxin efflux carrier component 3b OS=Oryza sativa subsp. japonica GN=PIN3B PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.171e-19 Identity = 46/57 (80.70%), Postives = 51/57 (89.47%), Query Frame = -1 Query: 90 GTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSSVVIFGMLITLPITVVYYIVLGL 260 GTLL +AIVQAALPQGIVPFVFAKEYN+H IL + VIFGMLI LPIT+VYYI+LGL Sbjct: 534 GTLLRIAIVQAALPQGIVPFVFAKEYNLHATILCTFVIFGMLIALPITLVYYIILGL 590
BLAST of DT214593 vs. ExPASy Swiss-Prot
Match: PIN6_ARATH (Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana GN=PIN6 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.408e-19 Identity = 40/57 (70.18%), Postives = 54/57 (94.74%), Query Frame = -1 Query: 90 GTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSSVVIFGMLITLPITVVYYIVLGL 260 G+ LH AIVQAALPQGIVPFVFA+EYN+HP +LS++VIFGM+++LP+T++YY++LGL Sbjct: 514 GSRLHAAIVQAALPQGIVPFVFAREYNLHPDLLSTLVIFGMIVSLPVTILYYVLLGL 570
BLAST of DT214593 vs. ExPASy Swiss-Prot
Match: PIN5_ARATH (Putative auxin efflux carrier component 5 OS=Arabidopsis thaliana GN=PIN5 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.067e-16 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = -1 Query: 90 TLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSSVVIFGMLITLPITVVYYIVLGL 257 TL VAI+QAALPQG+VPFVFAKEYN+HP I+S+ VIFGMLI LP T+ YY +L L Sbjct: 312 TLFKVAILQAALPQGVVPFVFAKEYNLHPEIISTGVIFGMLIALPTTLAYYFLLDL 367
BLAST of DT214593 vs. ExPASy Swiss-Prot
Match: PIN5_ORYSJ (Probable auxin efflux carrier component 5 OS=Oryza sativa subsp. japonica GN=PIN5 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.482e-14 Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = -1 Query: 90 GTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSSVVIFGMLITLPITVVYYIVLGL 260 GTLLH+A+VQAALP + FV+A+EY VH I+S+ VI G+ I+LP+T+VYYI+LGL Sbjct: 370 GTLLHIAVVQAALPLAVTSFVYAEEYKVHADIMSTGVILGIFISLPVTIVYYILLGL 426
BLAST of DT214593 vs. ExPASy Swiss-Prot
Match: PIN4_ORYSJ (Probable auxin efflux carrier component 4 OS=Oryza sativa subsp. japonica GN=PIN4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.527e-14 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = -1 Query: 93 GTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSSVVIFGMLITLPITVVYYIVLG 260 G +LH+AI+QAALPQ I FVFAKEY +H +LS+ VIFG LI+LPI + YY VLG Sbjct: 313 GDVLHLAIIQAALPQSIASFVFAKEYGLHADVLSTAVIFGTLISLPILIAYYAVLG 368
BLAST of DT214593 vs. ExPASy Swiss-Prot
Match: PIN6_ORYSJ (Probable auxin efflux carrier component 6 OS=Oryza sativa subsp. japonica GN=PIN6 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.140e-13 Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = -1 Query: 90 GTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSSVVIFGMLITLPITVVYYIVLGL 260 G +L VAI+QAALPQ I F+FAKEY +H +LS+ VIFGML++LP+ V +YIVL L Sbjct: 305 GDVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTAVIFGMLVSLPLLVGFYIVLEL 361
BLAST of DT214593 vs. ExPASy Swiss-Prot
Match: PIN8_ARATH (Putative auxin efflux carrier component 8 OS=Arabidopsis thaliana GN=PIN8 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.766e-13 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = -1 Query: 96 GTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSSVVIFGMLITLPITVVYYIVL 260 G +L VAI+QAALPQ I F+FAKEY +H +LS+ VIFGML++LP+ V YY L Sbjct: 293 GDVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTAVIFGMLVSLPVLVAYYAAL 347 The following BLAST results are available for this feature:
BLAST of DT214593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214593 ID=DT214593; Name=DT214593; organism=Citrus sinensis; type=EST; length=260bpback to top |