DT214592

Overview
NameDT214592
Unique NameDT214592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:689..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.135e-12
Identity = 49/153 (32.03%), Postives = 67/153 (43.79%), Query Frame = -1
Query:  253 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR 711
            KP++  LSNPTS+ E T EE   W+ G A+ A+GSPF PVE NG+     Q NN+YIFP     ++   A  + D M                     + PP   I+             A   GLA      + L++  E   + P YR+YR
Sbjct:  408 KPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGQGDAVLPPLKEIQQVSRKIALAVAKEAQAEGLALE-TSEEALLAAIERNFWLPGYRAYR 559          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12
Identity = 49/153 (32.03%), Postives = 66/153 (43.14%), Query Frame = -1
Query:  253 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR 711
            KP++  LSNPTS+ E T EE   W+ G A+ A+GSPF PVE NG+     Q NN+YIFP     ++   A  + D M                     + PP   I+             A   GLA      + L+   E   + P YR+YR
Sbjct:  408 KPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGQGDAVLPPLKEIQQVSRKIALAVAKEAQAEGLALE-TSEEALLEAIERNFWLPGYRAYR 559          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_YERE8 (NAD-dependent malic enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sfcA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E   E+   W+ G A+ A+GSPF PV Y  K++   Q NN+YIFP     ++ SGA  V D M
Sbjct:  410 RPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFSPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAKRVTDGM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12
Identity = 48/156 (30.77%), Postives = 70/156 (44.87%), Query Frame = -1
Query:  247 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*T 714
            E P++  LSNPTS+ E T +E   WS+G+AI A+GSPF    + G+ +   Q NN+YIFP     ++ + A  + D M             +     G I PP   IR             A +  LA      ++L    ++  + P YR YR T
Sbjct:  404 EHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDNMLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPVTA-ENLERRLKANFWLPKYRDYRRT 558          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            KP++  LSNPTS+ E T EE   W+ G A+ A+GSPF PVE NG+     Q NN+YIFP     ++   A  + D M
Sbjct:  408 KPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRM 484          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_BDEBA (NAD-dependent malic enzyme OS=Bdellovibrio bacteriovorus GN=sfcA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12
Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = -1
Query:  253 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR 714
            E P++  LSNPTS+ E T  +   W+ G+A+ A+GSPF PV  N +++   Q NN+YIFP     ++  GA  V D M                  KG + P  + I              A    +A +    ++L+S  +   + P YRSY+
Sbjct:  409 EHPIVMPLSNPTSRVEATPADILRWTDGKALVATGSPFMPVHMNDQIYPIAQCNNSYIFPGIGLGVLACGARRVTDSMLMAASSALADCSPLAQNGKGALLPELSQIEKVSRTIAFAVAKAAQADEVAVKV-SDEELLSLIDKNYWYPKYRSYK 561          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+P+IF LSNP+   E    +   WS+G+AI A+GSPF  VEY+G+++   Q NN+YIFP     ++   +  V DEM
Sbjct:  406 ERPIIFPLSNPSKHVEAHPADVLKWSEGKAIVATGSPFGEVEYDGRIYPIAQCNNSYIFPGIGLGVLSVKSERVSDEM 483          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++F LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  +   +   Q NN+YIFP     ++  GA  V +EM
Sbjct:  407 RPIVFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDDVTYDIAQCNNSYIFPGIGLGVLACGANRVSNEM 483          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 38/108 (35.19%), Postives = 54/108 (50.00%), Query Frame = -1
Query:  391 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIR 714
            E P++  LSNPTS+ E T +E  +WS+G+AI A+GSPF    +  + F   Q NN+YIFP     ++ + A  + D M             +     G I PP   IR
Sbjct:  404 EHPIVLPLSNPTSRVEATPQEVTSWSRGKAIVATGSPFPNTTFEDQSFEISQCNNSYIFPGIGLGVLAAHATGISDNMLMSASQALADISMEYEKAPGAILPPIKFIR 511          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = -1
Query:  481 ASFNEKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 726
            + + E+P+IF +SNPT   E  AE+   WS G+A+  +G P D +EY G  +  GQ NNA I+P      I + +  +  EM
Sbjct:  391 SGYTERPIIFPISNPTKLAEAKAEDVLKWSNGKALIGTGVPVDDIEYEGNAYQIGQANNALIYPGLGFGAIAAQSKLLTPEM 472          
The following BLAST results are available for this feature:
BLAST of DT214592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MAO1_PSESM2.135e-1232.03NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PSE142.789e-1232.03NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_YERE83.643e-1244.16NAD-dependent malic enzyme OS=Yersinia enterocolit... [more]
MAO1_PSYCK3.643e-1230.77NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_PSEU23.643e-1245.45NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_BDEBA4.757e-1229.87NAD-dependent malic enzyme OS=Bdellovibrio bacteri... [more]
MAO1_IDILO6.213e-1243.59NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAO1_SHEAM1.384e-1142.86NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO1_PSYA21.808e-1135.19NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MLES_OENOE2.361e-1137.80Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_04H04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214592 ID=DT214592; Name=DT214592; organism=Citrus sinensis; type=EST; length=726bp
TTTATTTCTGCTGAAACTAGGAAAGTTGGTATCATTTTCAATCAATAAAG
GAACAAAAAGAAAAAGGAGGTTCCTGATAGCAATGCTAAGAACCTCTACA
TGATTAAAACAAACCAAAATAGAAAACTAAATTTAAACTGATAAACAGGC
GACAAAGAAATATTAAAAAGAACAAAAATTAATATAACTAGGTTCGCAGC
AAATTGCAAAATGCAAACTATAATCGCACACTTCCACATGGAGTTCAGTT
CAACGGTAGCTTCGGTACATTGGGCTGTACATGCAGCTCTCAGCGTAACT
CACTAAATCCTTAGGACAAGGAAAACGGGAAGCCAGACCAAGGTCATATG
CCTTGGCAGCAACTTTAGCAGCAATGTGGGCAGAGATCTTTCTGATATTA
GTGAAGGGGGGGTATATCAATCCCTTATCGAAGTGCTCTTGTGTCACTTG
CGCTGCCAAAGCTTCCGAGGCTGCTAGAAGCATCTCATCGCGGACACAAA
TTGCACCGGATATTATCAAACCCAGACCCAATCCGGGGAATATATAAGCA
TTGTTTCCCTGGCCAGGCACAAAAACTTTCCCATTGTATTCAACAGGGTC
AAATGGGCTTCCACTAGCAAAGATTGCTTGACCCTTACTCCATGTATAAG
CTTCTTCCGCTGTACACTCAAACTGTGAGGTAGGATTGGATAGAGCAAAA
ATAACGGGTTTCTCATTAAAGGATGC
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