DT214592

Overview
NameDT214592
Unique NameDT214592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:689..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = -1
Query:  391 SFNEKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIR 723
            S + +P IF +SNPT   ECT EEA++      IFASGSPF  V+  NG V    Q NN ++FP      ++SG+  V D M         A +T+E   KG+IYP  + IR
Sbjct:  455 STSTRPAIFPMSNPTRNAECTPEEAFSILGENIIFASGSPFKDVDLGNGHVGHCNQANNMFLFPGIGLGTLLSGSRIVSDGMLQAAAECLAAYITEEEVLKGIIYPSISRIR 566          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = -1
Query:  247 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*T 714
            ++P++F LSNPTS+ E T  +   W+ G+A+ A+GSPFDPV + G+ +   Q NN+YIFP     ++   A  V DEM                  +G + PP   I              A + G+A      + L    +   + P+YR Y+ T
Sbjct:  406 KRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFDPVVHEGRTYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGRGALLPPLEEIHLVSKKIAFAVAKKAIEQGVALEI-TDEALNDAIDQAFWQPVYRRYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = -1
Query:  247 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYA-ESCMYSPMYRSYR*T 711
            +P++F LSNPTS+ E T ++   W+KGQA+ A+GSPF+PV    + F   Q NN+YIFP     ++ +GA  V +EM                  +G + PP   I              A + G A   PC  +L+  + E   ++  YR Y+ T
Sbjct:  407 RPIVFPLSNPTSRVEATPKDLLHWTKGQALVATGSPFEPVVVEDETFEIAQCNNSYIFPGIGLGVLAAGAKRVSNEMLMASSRALAECSPLALDGEGPLLPPLEEIHKVSKHIALAVGKVAIEQGHA--LPCTDELLEQSIEDNFWTAEYRRYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 51/157 (32.48%), Postives = 71/157 (45.22%), Query Frame = -1
Query:  247 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVS-YAESCMYSPMYRSYR*T 714
            + P++  LSNPTS+ E T ++  TWS GQAI A+GSPF P  Y  +     Q NN+YIFP     ++ + A  + D M             Q    KG + PP   IR             A   GLA   P  ++ +        ++P YR+YR T
Sbjct:  404 DHPIVLPLSNPTSRVEATPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDNMLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLA--LPVSEETMQRRLVDNFWAPKYRTYRRT 558          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = -1
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  K++   Q NNAYIFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFAPVAWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKYSPLVLNGEGLVLPELKDIQTVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDENFWQAEYRDYRRTSI 565          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHELP (NAD-dependent malic enzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+P+IF LSNPTS+ E T ++   W+KGQA+ A+GSPF+PV    + +   Q NN+YIFP     ++ SGA  V +EM
Sbjct:  406 ERPIIFPLSNPTSRVEATPKDILHWTKGQALVATGSPFEPVVIEEQTYEIAQCNNSYIFPGIGLGVLASGAKRVSNEM 483          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 51/155 (32.90%), Postives = 72/155 (46.45%), Query Frame = -1
Query:  247 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*T 711
            +P+I  LSNPTS+ E   E+   W+ G A+ ASGSPF+PV Y G+ +   Q NNAYIFP     ++ SGA  V D M                   G + P   +I+             A   G+A +    + L+   E   + P+YRSY+ T
Sbjct:  410 RPIIMPLSNPTSRVEARPEDIINWTDGAALVASGSPFEPVLYQGERYPIAQCNNAYIFPGIGLGVLASGARRVTDGMLMAASRALADSSPLARDGHGSLLPDLKDIQQVSRDIAFQVAKAAQRQGVAVQ-TSDEALLQAIEHNFWLPIYRSYKRT 563          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+P++  LSNPTS+ E    +   W+ G+A+ A+GSPF PV Y GK++   Q NN+YIFP     +I SGA  V D M
Sbjct:  410 ERPIVMPLSNPTSRVEALPSDVIQWTNGRALIATGSPFAPVNYQGKLYNISQCNNSYIFPGIGLGVIASGAKRVTDNM 487          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHISS (NAD-dependent malic enzyme OS=Shigella sonnei (strain Ss046) GN=sfcA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHIFL (NAD-dependent malic enzyme OS=Shigella flexneri GN=sfcA PE=3 SV=4)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
The following BLAST results are available for this feature:
BLAST of DT214592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MAOM_SOLTU1.747e-1441.07NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAO1_VIBPA2.980e-1430.13NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_SHESH6.638e-1432.05NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_PSYIN6.638e-1432.48NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_CITK88.670e-1430.57NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO1_SHELP1.132e-1347.44NAD-dependent malic enzyme OS=Shewanella loihica (... [more]
MAO1_EDWI91.132e-1332.90NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]
MAO1_ACIAD1.132e-1346.15NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_SHISS1.479e-1329.94NAD-dependent malic enzyme OS=Shigella sonnei (str... [more]
MAO1_SHIFL1.479e-1329.94NAD-dependent malic enzyme OS=Shigella flexneri GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_04H04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214592 ID=DT214592; Name=DT214592; organism=Citrus sinensis; type=EST; length=726bp
TTTATTTCTGCTGAAACTAGGAAAGTTGGTATCATTTTCAATCAATAAAG
GAACAAAAAGAAAAAGGAGGTTCCTGATAGCAATGCTAAGAACCTCTACA
TGATTAAAACAAACCAAAATAGAAAACTAAATTTAAACTGATAAACAGGC
GACAAAGAAATATTAAAAAGAACAAAAATTAATATAACTAGGTTCGCAGC
AAATTGCAAAATGCAAACTATAATCGCACACTTCCACATGGAGTTCAGTT
CAACGGTAGCTTCGGTACATTGGGCTGTACATGCAGCTCTCAGCGTAACT
CACTAAATCCTTAGGACAAGGAAAACGGGAAGCCAGACCAAGGTCATATG
CCTTGGCAGCAACTTTAGCAGCAATGTGGGCAGAGATCTTTCTGATATTA
GTGAAGGGGGGGTATATCAATCCCTTATCGAAGTGCTCTTGTGTCACTTG
CGCTGCCAAAGCTTCCGAGGCTGCTAGAAGCATCTCATCGCGGACACAAA
TTGCACCGGATATTATCAAACCCAGACCCAATCCGGGGAATATATAAGCA
TTGTTTCCCTGGCCAGGCACAAAAACTTTCCCATTGTATTCAACAGGGTC
AAATGGGCTTCCACTAGCAAAGATTGCTTGACCCTTACTCCATGTATAAG
CTTCTTCCGCTGTACACTCAAACTGTGAGGTAGGATTGGATAGAGCAAAA
ATAACGGGTTTCTCATTAAAGGATGC
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