DT214592

Overview
NameDT214592
Unique NameDT214592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:689..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECO7I (NAD-dependent malic enzyme OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECO45 (NAD-dependent malic enzyme OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECO27 (NAD-dependent malic enzyme OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            ++P++F LSNPTS+ E T  +   W+ G A+ A+GSPF+PV +NGK +   Q NN+YIFP     ++   A  V DEM
Sbjct:  406 KRPIVFPLSNPTSRVEATPADIINWTDGNALVATGSPFEPVVHNGKTYPIAQCNNSYIFPGIGLGILAVNARRVTDEM 483          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 50/156 (32.05%), Postives = 70/156 (44.87%), Query Frame = -1
Query:  247 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYA-ESCMYSPMYRSYR*T 711
            +P++F LSNPTS+ E    +   W+ G A+ A+GSPFDPV + GK +   Q NN+YIFP     ++   A  V DEM                  KG + PP   I              A + G+A       D +  A E   + P+YR Y+ T
Sbjct:  407 RPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVA--LEIADDALQVAIEQHFWQPVYRRYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 46/156 (29.49%), Postives = 71/156 (45.51%), Query Frame = -1
Query:  247 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*T 714
            ++P++F LSNPTS+ E T  +   W+ G+A+ A+GSPF+PV + G+ +   Q NN+YIFP     ++   A  V DEM                   G + PP   I              A + G+A      + L    +   + P+YR Y+ T
Sbjct:  406 KRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFEPVVHEGRSYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGNGALLPPLEEIHLVSKKIAFAVAKKAIEQGVALEI-TDEALNDAIDQAFWQPVYRRYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPA (NAD-dependent malic enzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = -1
Query:  247 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYA-ESCMYSPMYRSYR*T 714
            ++P++F LSNPTS+ E T ++   W++GQA+ A+GSPF+PV  +   +   Q NN+YIFP     ++ SGA  V D M                  +G + P   +I              A + G A   P   +L++YA E   ++  YRSY+ T
Sbjct:  406 KRPIVFPLSNPTSRVEATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVSDAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHA--LPTTNELLTYAIEDNFWTAEYRSYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 50/156 (32.05%), Postives = 70/156 (44.87%), Query Frame = -1
Query:  247 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYA-ESCMYSPMYRSYR*T 711
            +P++F LSNPTS+ E    +   W+ G A+ A+GSPFDPV + GK +   Q NN+YIFP     ++   A  V DEM                  KG + PP   I              A + G+A       D +  A E   + P+YR Y+ T
Sbjct:  407 RPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVA--LEIADDALQVAIEQHFWQPVYRRYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = -1
Query:  391 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIR 711
            +P IFA+SNPT+  EC   +A+  +    +FASGSPF  V+  NGK+    Q NN Y+FP      ++SGA  + D M         + ++ +  ++G++YP   +IR
Sbjct:  436 RPAIFAMSNPTNNAECCPVDAFKLAGEDIVFASGSPFANVDLGNGKIGHVNQANNMYLFPGIGLGALLSGARNISDTMLEAAAECLASYMSDDEINRGILYPSIDDIR 543          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 49/156 (31.41%), Postives = 74/156 (47.44%), Query Frame = -1
Query:  247 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYA-ESCMYSPMYRSYR*T 711
            +P+IF LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  +G+ +   Q NN++IFP     ++ SGA  V D M                   G + P   +I              A + GL    P   +++  + E   +SP YR Y+ T
Sbjct:  407 RPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLT--LPMSDEILQQSIEGNFWSPEYRRYKRT 560          
The following BLAST results are available for this feature:
BLAST of DT214592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MAO1_ECO7I1.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli O7:... [more]
MAO1_ECO451.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli O45... [more]
MAO1_ECO271.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli O12... [more]
MAO11_PHOPR1.931e-1344.87NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_VIBVU2.523e-1332.05NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO1_VIBHB2.523e-1329.49NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAO1_SHEPA2.523e-1331.85NAD-dependent malic enzyme OS=Shewanella pealeana ... [more]
MAO11_VIBVY2.523e-1332.05NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAON_SOLTU4.303e-1335.19NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAO1_SHEB94.303e-1331.41NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_04H04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214592 ID=DT214592; Name=DT214592; organism=Citrus sinensis; type=EST; length=726bp
TTTATTTCTGCTGAAACTAGGAAAGTTGGTATCATTTTCAATCAATAAAG
GAACAAAAAGAAAAAGGAGGTTCCTGATAGCAATGCTAAGAACCTCTACA
TGATTAAAACAAACCAAAATAGAAAACTAAATTTAAACTGATAAACAGGC
GACAAAGAAATATTAAAAAGAACAAAAATTAATATAACTAGGTTCGCAGC
AAATTGCAAAATGCAAACTATAATCGCACACTTCCACATGGAGTTCAGTT
CAACGGTAGCTTCGGTACATTGGGCTGTACATGCAGCTCTCAGCGTAACT
CACTAAATCCTTAGGACAAGGAAAACGGGAAGCCAGACCAAGGTCATATG
CCTTGGCAGCAACTTTAGCAGCAATGTGGGCAGAGATCTTTCTGATATTA
GTGAAGGGGGGGTATATCAATCCCTTATCGAAGTGCTCTTGTGTCACTTG
CGCTGCCAAAGCTTCCGAGGCTGCTAGAAGCATCTCATCGCGGACACAAA
TTGCACCGGATATTATCAAACCCAGACCCAATCCGGGGAATATATAAGCA
TTGTTTCCCTGGCCAGGCACAAAAACTTTCCCATTGTATTCAACAGGGTC
AAATGGGCTTCCACTAGCAAAGATTGCTTGACCCTTACTCCATGTATAAG
CTTCTTCCGCTGTACACTCAAACTGTGAGGTAGGATTGGATAGAGCAAAA
ATAACGGGTTTCTCATTAAAGGATGC
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