DT214590

Overview
NameDT214590
Unique NameDT214590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:234..1039. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.614e-28
Identity = 76/215 (35.35%), Postives = 109/215 (50.70%), Query Frame = -2
Query:  174 DQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-----DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 800
            D +  +P D+TK WP    PLQ VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ R+F+YGD QR+RLG N   +PVN P+CP    H DG M    +      Y P+ Y      P +      +  DV      +     ++ + QPG+ +R    D Q+       +A+ D  +  + R +   Y  +AD + G  +A  L +
Sbjct:  269 DNYRINPFDLTKVWPHKDFPLQDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAMRVDGNYGSAKGYEPNSYGEWQDSPEKKEPPLKVHGDVFNYNERE---YDDDYYSQPGDLFRLMPADEQQLLFENTARAMGDAELFIKQRHVRNCY--KADPAYGTGVAQALGI 478          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 3.653e-27
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = -2
Query:  345 DQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQP 800
            ++++F+P DVTK WP    PL  VG++VLN+N  N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT  HRLGPNY+ LPVN   CP+R    N   DG M + ++    ++FP+ ++  +        +   TG  ++     +NN+ QP
Sbjct:  286 EKWEFNPFDVTKVWPHGDYPLIEVGKMVLNRNPRNYFAEVEQSAFCPAHIVPGIEFSPDKMLQGRIFSYTDTHFHRLGPNYIQLPVN---CPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVKDTTFPATGDVDRYESGDDNNYDQP 438          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.232e-27
Identity = 64/162 (39.51%), Postives = 94/162 (58.02%), Query Frame = -2
Query:  333 EDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHA-----ERYPIPSDVITGRREKACIEKENNFKQPGERY 803
            +D+F+FD  D TK WPE+ +PL+ VG L LN+NID FF E E +AF    +VPGI +S+D +LQ R F+Y DTQ  RLG N+  +P+N P CP  N++ DG          V+Y+P+R++    A     + +P P   ITGR+ +    K   +    + +
Sbjct:  311 QDKFEFDIFDATKVWPEEQVPLRVVGELELNRNIDEFFPETEQVAFCTSHIVPGIDFSDDPLLQGRNFSYQDTQISRLGVNWEEIPINRPVCPFLNHNRDGAKRHRITKGTVNYWPNRFEANPPASDKGFKSHPAP---ITGRKRRDLTPKFKEYHNQAQLF 469          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 120.939 bits (302), Expect = 8.139e-27
Identity = 69/208 (33.17%), Postives = 112/208 (53.85%), Query Frame = -2
Query:  174 FDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 794
            + FDP DVTK W +   PL  VGR+VL++N +N+FAE E   F+PG +VPGI  S DKMLQ R+FAY D  R+R+G N+  LP+N  +    N   DG M F  +    V Y P+ +   + +      +  + G  +    +  +++ Q G+ YR  + D + R +   + A+  P    E++   + ++ +AD   G+++A  L +
Sbjct:  271 YRFDPFDVTKVWSQKDYPLIEVGRMVLDRNPENYFAEVEQATFSPGTLVPGIDVSPDKMLQGRLFAYHDAHRYRVGANHQALPINRARNKVNNYQRDGQMRFDDNGGGSVYYEPNSFGGPKESPEDKQAAYPVQGIADSVSYDHYDHYTQAGDLYRLMSEDERTRLVENIVNAM-KPVEKEEIKLRQIEHFYKADPEYGKRVAEGLGL 477          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.139e-27
Identity = 56/120 (46.67%), Postives = 81/120 (67.50%), Query Frame = -2
Query:  444 EDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 803
            +D F+FD LD TK WPED++PL+ +G L LN+N+D FF + E +AF    +VPGI +++D +LQ R F+Y DTQ  RLG N+  LP+N P CP  N++ DG M        V+Y+P+R++
Sbjct:  311 QDDFEFDILDATKIWPEDLVPLRVIGELELNRNVDEFFPQTEQVAFCTSHIVPGIDFTDDPLLQGRNFSYFDTQISRLGINWEELPINRPVCPVLNHNRDGQMRHRITQGTVNYWPNRFE 430          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.063e-26
Identity = 76/213 (35.68%), Postives = 111/213 (52.11%), Query Frame = -2
Query:  174 DQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-CPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKEN-NFKQPGERYRSWAPD-RQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 800
            + + FD  D+TK WP    P   +G+LVLN+N  N+FAE E  AF+P  +VPGI  S DKMLQ R+F+Y DT  HRLGPNY ++PVNAPK  P  +   DGFM    +     +Y+P+ +        Y  P   ++G   +      N +F Q G  YR    D  +E  +   +  L   +   ++R    + + +ADR  G ++A  L +
Sbjct:  273 EDYRFDIRDITKVWPHGDFPTMKIGKLVLNRNPTNYFAEVEQAAFSPANLVPGIGISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFMRVDANGGSGPNYWPNSFGGPSPDSVYLEPPFGVSGLAARTLYTHPNDDFVQAGNLYRDVMTDYDRENLVGNIVSHLSAAQKRIQLRQ--TALFFKADRDYGSRVAKGLEL 483          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 1.063e-26
Identity = 72/178 (40.45%), Postives = 97/178 (54.49%), Query Frame = -2
Query:  276 FDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKAL 794
            F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  M ++    +Y+P+ +    H               + + +E   +F    +R+ S   D   +    ++K L
Sbjct:  292 FPFNPFDLTKVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEH---------------QPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVL 451          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.388e-26
Identity = 67/168 (39.88%), Postives = 91/168 (54.17%), Query Frame = -2
Query:  291 FDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREK-ACIEKENNFKQPGERYRSWAPDRQERFLNR 788
            ++P D+TK WP    PL  VG   LN+N DN+F++ E  AF+P  +VPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNAPKCP  N H DG M    +    + Y P+     +    +  P   I G  +     E E+ F QP   Y   + D  +R   R
Sbjct:  273 YNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFAR 440          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.388e-26
Identity = 68/175 (38.86%), Postives = 99/175 (56.57%), Query Frame = -2
Query:  294 EDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAE----RYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQERFLN 803
            E +FDFD LD TK WPED++P++ +G + LN+N D FF + E +AF    VV GI +S+D +LQ R F+Y DTQ  RLG N+  LP+N P CP  N + DG M        V+Y+P+R+D    A      Y   +  + G + +A   K + +F Q    Y S +P  ++  +N
Sbjct:  310 EHKFDFDILDATKIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSHVVNGIGFSDDPLLQGRNFSYFDTQISRLGVNFQELPINRPVCPVMNFNRDGAMRHTISRGTVNYYPNRFDACPPASLKEGGYLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSMSPIEKQHMIN 484          
BLAST of DT214590 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.813e-26
Identity = 58/121 (47.93%), Postives = 80/121 (66.12%), Query Frame = -2
Query:  444 EDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 803
            E +FDFD LD TK  PE+++P+ P+G++VLN+N DNFFAE E +AF PG +VPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P  P+ NN  D     +       Y P+  D
Sbjct:  310 EHKFDFDLLDPTKIIPEELVPVTPLGKMVLNRNPDNFFAEVEQVAFCPGHIVPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHQIPINRPVAPNHNNQRDALHQHVVHKGRASYEPNSID 430          
The following BLAST results are available for this feature:
BLAST of DT214590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_BACFR9.614e-2835.35Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA1_CAEEL3.653e-2742.31Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA_EMENI6.232e-2739.51Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATA_BACSU8.139e-2733.17Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_ASPFU8.139e-2746.67Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CATA_METBF1.063e-2635.68Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA_BOVIN1.063e-2640.45Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATA_PROMI1.388e-2639.88Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CAT1_NEUCR1.388e-2638.86Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]
CATE_PSEPU1.813e-2647.93Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_04D04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_B02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214590 ID=DT214590; Name=DT214590; organism=Citrus sinensis; type=EST; length=807bp
GGAAAAAGTCACATAACATGCAAGTTTATTTTCTATATTACAATATACAA
CAGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCA
CTCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAG
TGACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTG
ACCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAA
CCTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGG
AACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTG
CTTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAA
TTACATCAGAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATCATAC
CTCGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAA
ACCATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAA
GCATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCA
AAGATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAAC
CACGATACCAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTAT
CGATGTTCTTGTTCAAGACCAAGCGTCCAACTGGCTGCAGAGGGATGATG
TCCTCAGGCCACCACTTGGTTACGTCCAGTGGGTCAAAGTCAAATTGGTC
CTCGTGA
back to top