DT214588

Overview
NameDT214588
Unique NameDT214588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.306e-24
Identity = 61/212 (28.77%), Postives = 109/212 (51.42%), Query Frame = -1
Query:  123 LDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPR 755
            L +  +     + I    +T+ +  EWA  EL K+P + D+  +E+  V G E+ F+E+ +  +P++  +  ET+R +  AP++  R A ED ++ GY +  G+++ +N +    D   WE P ++ PERFL        +  + + FGAG+R+C G      +   ++  L+  F WKL      +E N+ + + L +QK  PL  +  PR
Sbjct:  301 LTKEQIAILVWETIIETADTTLVTTEWAIYELAKHPSVQDRLCKEIQNVCGGEK-FKEEQLSQVPYLNGVFHETLRKYSPAPLVPIRYAHEDTQIGGYHVPAGSEIAINIYGCNMDKKRWERPEDWWPERFLDDGKYETSDLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKL---RDGEEENV-DTYGLTSQKLYPLMAIINPR 507          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.306e-24
Identity = 63/203 (31.03%), Postives = 106/203 (52.22%), Query Frame = -1
Query:  138 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGAPML-MPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLG--KSIDVKG-NDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTW-KLPGNMS---NKELNMEEVFKLANQKKIPLEV 722
            + + G T+T+   LEW    L++NP I ++  +E+  ++G ++  +E DI  +P++ A++KE +R H      +     E  K+AGYDI   T V      I  DP +W +P +F P+RFL   +  D+ G  + +++PFG GRR+CPG       +   LA ++  F W   PGN     +++L    V K   + K+ L +
Sbjct:  298 EFLNGGTDTTATALEWGIGRLMENPTIQNQLYQEIKTIVGDKK-VDENDIEKMPYLNAVVKELLRKHPPTYFTLTHSVTEPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPLRAKVKLRI 499          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_ONCMY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.253e-23
Identity = 53/149 (35.57%), Postives = 91/149 (61.07%), Query Frame = -1
Query:  288 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL---GKSIDVKGNDFELLPFGAGRRMCPG 722
            D+     ET++ +L+WA A L+ +P++  + +EELD V+G +R  +  D  +LP++EA I+E +R+   AP+L+P +A+ D  +  + + KG ++++N W++  D   W+NP  F P RFL   G  + +    +  LPFGAG R+C G
Sbjct:  305 DIFGAGVETTSTVLKWAIAYLIHHPQVQQRIQEELDSVVGGDRTPQLSDRGSLPYLEATIREVLRIRPVAPLLIPHVAQTDTSIGKFTVRKGARIIINLWSLHHDEKEWKNPEMFDPGRFLNEEGTGLCIPSPSY--LPFGAGVRVCLG 451          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_SHEEP (Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 65/177 (36.72%), Postives = 89/177 (50.28%), Query Frame = -1
Query:  237 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDV-KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLH 761
            ++L    +    +DL     +T T  + W+   LV +P +  K +EELD VIG+ RW +  D   LP++EA I ET R     P  +P     D  + G+ I KG  V VN W I  D  LWE+P+EF PERFL     V K    +++ FG G+R C G       +   LA LLH
Sbjct:  307 IQLSDEKIINVVMDLFGAGFDTVTTAISWSLLYLVTSPRVQKKIQEELDTVIGRARWPQLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTNLNGFYIPKGXCVFVNQWQINHDQKLWEDPSEFRPERFLTTDGTVNKVLSEKVIIFGLGKRQCIGEIIARLEVFLFLAILLH 483          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = -1
Query:  183 ETSTLMLEWAFAELVKNPEILDKAREELDRVIGK-ERWFEEKDIVNLPFIEAIIKETMRLHGAPMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNME 701
            +T+   + W+   L  NPE+  K   ELD V GK +R    +D+  L ++E +IKET+RL  +  L  R   EDC+VAGY +LKGT+ ++  + + RDP  + NP EF PERF  ++   + + +  +PF AG R C G    +   ++ L+ +L  F W +  N   +EL +E
Sbjct:  332 DTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGR-HPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHF-W-IESNQKREELGLE 502          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_MOUSE (Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 70/187 (37.43%), Postives = 96/187 (51.34%), Query Frame = -1
Query:  213 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS--IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKL-PG 761
            V+L    V    LDL     +T T  + W+   LV NP +  K +EELD VIG++R     D   LP++EA I ET R     P  +P     D  + G+ I KG  V VN W +  D  LW +PNEF PERFL  S  +D + ++ ++  FG G+R C G + G   +   LA LL    +K+ PG
Sbjct:  304 VQLSDDKVITIVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTSLNGFYIPKGCCVFVNQWQVNHDRELWGDPNEFRPERFLTPSGTLDKRLSE-KVTLFGLGKRKCIGETIGRSEVFLFLAILLQQIEFKVSPG 489          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP4V2_PONAB (Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.121e-23
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = -1
Query:  183 ETSTLMLEWAFAELVKNPEILDKAREELDRVIGK-ERWFEEKDIVNLPFIEAIIKETMRLHGAPMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNME 701
            +T+   + W+   L  NPE+  K   ELD V GK +R    +D+  L ++E +IKET+RL  +  L  R   EDC+VAGY +LKGT+ ++  + + RDP  + NP EF PERF  ++   + + +  +PF AG R C G    +   ++ L+ +L  F W +  N   +EL +E
Sbjct:  332 DTTAAAINWSLYLLGCNPEVQQKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGR-HPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHF-W-IESNQKREELGLE 502          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: C516A_DICDI (Probable cytochrome P450 516A1 OS=Dictyostelium discoideum GN=cyp516a1 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = -1
Query:  159 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGAPML-MPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQ 722
            DL+   TETS+  + W    L+ NP   DK R EL    G ++     +    PF  A IKE +R+     L +PR+A ED     Y I KG+Q+++N + +  DP +WE+P  F P R+L  S D+  + +  +PFG G R+C G S     I   + N+L  + ++   + + K +N +  F +A Q
Sbjct:  293 DLLLSGTETSSSTMSWLLLFLINNPNFQDKVRTELLEATGGKKTIGLTEKSKTPFFNACIKEALRIRPVGALSLPRIASEDVTCGPYTIEKGSQIIMNVYGLAMDPTVWEDPETFNPYRWL--SSDISQSTYSFIPFGCGSRVCVGSSLARDEIFLGIGNILLNYIFE---SQNGKPINEKGHFGIALQ 476          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2J3_RAT (Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.363e-22
Identity = 62/174 (35.63%), Postives = 89/174 (51.15%), Query Frame = -1
Query:  210 TLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGN 728
            TLDL    TET++  L WA   +   PE+ +K + E+DRVIG+ R     D  ++P+  A+I E  R+    P  +PR    D  +AG+++ KGT +L N   + RDP  W  P+ F PE FL      K   F  LPF  G+R C G       +   + +L+  FT+K P N
Sbjct:  305 TLDLFFAGTETTSTTLRWALLCMALYPEVQEKMQAEIDRVIGQGRQPNLADRDSMPYTNAVIHEVQRIGNIIPFNVPREVAVDTYLAGFNLPKGTMILTNLTALHRDPKEWATPDTFNPEHFLENGQFKKRESF--LPFSMGKRACLGEQLARSELFIFITSLIQKFTFKPPVN 476          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.086e-22
Identity = 68/185 (36.76%), Postives = 92/185 (49.73%), Query Frame = -1
Query:  216 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL--GKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 761
            V+L    +    LDL     +T T  + W+   LV NP +  K +EELD VIG+ R     D  +LP++EA I ET R     P  +P     D  + G+ I KG  V VN W I  D  LW NP+EF PERFL    +ID K    +++ FG G+R C G +     +   LA LL    + +P
Sbjct:  300 VQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVP 483          
The following BLAST results are available for this feature:
BLAST of DT214588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KO1_ARATH4.306e-2428.77Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
C77A1_SOLME4.306e-2431.03Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
CP17A_ONCMY1.253e-2335.57Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorh... [more]
CP1A1_SHEEP2.791e-2336.72Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 S... [more]
CP4V2_HUMAN4.761e-2335.63Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP1A1_MOUSE6.218e-2337.43Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1... [more]
CP4V2_PONAB8.121e-2335.63Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2... [more]
C516A_DICDI1.061e-2232.80Probable cytochrome P450 516A1 OS=Dictyostelium di... [more]
CP2J3_RAT2.363e-2235.63Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3... [more]
CP1A1_HUMAN3.086e-2236.76Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_03F04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0003d_C02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214588 ID=DT214588; Name=DT214588; organism=Citrus sinensis; type=EST; length=875bp
AGCTCAATTTTCACCAAAATGGATTATGAAATTATTACTTACGATAAGTT
TATTATTTTGGAAGCCATGTAAATTTATTATTTTGGCATCCACAATCACA
CATTGTAAAGATGGGGAGCAAGTCTTGGCTGAGCTACAACTTCAAGTGGA
ATTTTTTTCTGATTAGCAAGCTTAAAAACTTCCTCCATATTAAGCTCCTT
ATTGCTCATATTCCCAGGCAATTTCCATGTAAATCCATGCAAAAGATTAG
CCAGGCTTGATTGAATCACCTTCAGCCCATTACTGTAACCTGGACACATT
CTTCTCCCCGCTCCAAATGGCAGTAACTCAAAATCATTTCCTTTGACATC
AATTGATTTTCCAAGAAACCTCTCAGGGCAAAACTCATTGGGGTTTTCCC
ACAGAGCGGGGTCTCTCTCTATTGTCCACGTATTAACTAGTACTTGAGTG
CCTTTCAAGATGTCGTAGCCCGCAACTTTGCAATCTTCTCTAGCCATCCT
GGGCATAAGCATTGGAGCACCGTGCAAACGCATTGTTTCTTTAATTATGG
CCTCAATAAATGGGAGATTAACAATGTCTTTCTCTTCAAACCACCTTTCT
TTTCCAATTACTCTGTCTAGTTCTTCTCTTGCTTTATCTAAAATTTCCGG
ATTTTTCACTAATTCAGCGAAGGCCCATTCCAACATCAATGTTGAGGTCT
CAGTCGCTCCAGCTATTAGGTCCAATGTAAAACCTTTGACGCTGTGTCTG
TCCAGCTTAACTTCGAGAGTAGGATCATCAGCAAGCAGCAAAAGCACATC
CACCATATCTTTAGCCACATAATTATCGATCCCTTTTCGTCTAGCATTAT
GTTCATCAACCACCTGCTCTAAAAA
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