DT214588

Overview
NameDT214588
Unique NameDT214588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_CANFA (Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 65/185 (35.14%), Postives = 92/185 (49.73%), Query Frame = -1
Query:  216 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGA--PMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDV-KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 761
            ++L    +    LDL     +T T  + W+   LV NP +  K ++ELD VIG+ R     D   LP++EA I ET R H +  P  +P     D  ++G+ I KG  V VN W I  D  LW NP+EF PERFL     + K    +++ FG G+R C G +     +   LA LL    + +P
Sbjct:  304 IQLSDEKIVNVVLDLFGAGFDTVTTAISWSLLYLVTNPNVQKKIQKELDTVIGRARQPRLSDRPQLPYMEAFILETFR-HASFVPFTIPHSTTRDTSLSGFYIPKGRCVFVNQWQINHDQKLWGNPSEFQPERFLTLDGTINKALSEKVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVP 487          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 61/173 (35.26%), Postives = 91/173 (52.60%), Query Frame = -1
Query:  216 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL---GKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 722
            D+     ETS+    W    L+ +PE+  K +EE+D  IG ER  +  D  N+ F+ A I E +R+   +P+L+P +A  D  +  Y I KGT+V++N W I  D   W+NP+ F P RFL   GK +      +  LPFGAG R+C G       +    + +L  FT ++P
Sbjct:  301 DIFGAGVETSSTAFAWMIIYLIHHPEVQKKIQEEIDSNIGFERTPKMSDKGNMNFLNATIHEILRIQPVSPLLIPHVALADSSIGDYTIPKGTRVIINLWAIHHDEKEWKNPDAFDPGRFLDEDGKYVCSSSESY--LPFGAGTRVCLGEMLARMELFLFTSWILQRFTVQVP 471          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_PAPCY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio cynocephalus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 65/199 (32.66%), Postives = 104/199 (52.26%), Query Frame = -1
Query:  138 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP--GNMSNKELNMEEVFKLANQKKIPLEV 722
            D+     ET+T +++W  A L+ NP++  K  EE+D+ +G  R     D   L  +EA I+E +R+   APML+P  A  D  +  + + KGT V++N W +  +   W  P++F PERFL  +   +       LPFGAG R C G     + +   +A LL  F  ++P  G + + E N + VF L +  K+ ++V
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVF-LIDSFKVKIKV 495          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_PANTR (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 65/199 (32.66%), Postives = 104/199 (52.26%), Query Frame = -1
Query:  138 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP--GNMSNKELNMEEVFKLANQKKIPLEV 722
            D+     ET+T +++W  A L+ NP++  K  EE+D+ +G  R     D   L  +EA I+E +RL   APML+P  A  D  +  + + KGTQV++N W +  +   W  P++F PERFL  +   +       LPFGAG R C G     + +   +A LL  F  ++P  G + + E  + +V  L +  K+ ++V
Sbjct:  298 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTQVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLE-GIPKVVFLIDSFKVKIKV 495          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 65/199 (32.66%), Postives = 104/199 (52.26%), Query Frame = -1
Query:  138 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP--GNMSNKELNMEEVFKLANQKKIPLEV 722
            D+     ET+T +++W  A L+ NP++  K  EE+D+ +G  R     D   L  +EA I+E +R+   APML+P  A  D  +  + + KGT V++N W +  +   W  P++F PERFL  +   +       LPFGAG R C G     + +   +A LL  F  ++P  G + + E N + VF L +  K+ ++V
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVF-LIDSFKVKIKV 495          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 65/199 (32.66%), Postives = 104/199 (52.26%), Query Frame = -1
Query:  138 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP--GNMSNKELNMEEVFKLANQKKIPLEV 722
            D+     ET+T +++W  A L+ NP++  K  EE+D+ +G  R     D   L  +EA I+E +R+   APML+P  A  D  +  + + KGT V++N W +  +   W  P++F PERFL  +   +       LPFGAG R C G     + +   +A LL  F  ++P  G + + E N + VF L +  K+ ++V
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVF-LIDSFKVKIKV 495          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 62/173 (35.84%), Postives = 93/173 (53.76%), Query Frame = -1
Query:  216 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL---GKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 722
            D+     ET+T +L+WA   L+  PE+  K +EE+D+ IG  R     D   LP++EA I E +R+   +P+L+P ++  D  +  Y I KG +V++N W++  D   W+ P EF P RFL   G+ I      +  LPFGAG R+C G       +   LA +L  FT + P
Sbjct:  301 DIFGAGVETTTTVLKWAVLYLLHYPEVQKKIQEEMDQKIGLARHPHLSDRPLLPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRFLDEQGQHIHSPSPSY--LPFGAGIRVCLGEVLAKMELFLFLAWVLQRFTLECP 471          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_RAT (Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 67/176 (38.07%), Postives = 88/176 (50.00%), Query Frame = -1
Query:  240 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDV-KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLL 761
            V+L    V     DL     +T T  + W+   LV NP I  K +EELD VIG++R     D   LP++EA I ET R     P  +P     D  + G+ I KG  V VN W +  D  LW +PNEF PERFL  S  + K    +++ FG G+R C G + G   +   LA LL
Sbjct:  304 VQLSDDKVITIVFDLFGAGFDTITTAISWSLMYLVTNPRIQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTIRDTSLNGFYIPKGHCVFVNQWQVNHDQELWGDPNEFRPERFLTSSGTLDKHLSEKVILFGLGKRKCIGETIGRLEVFLFLAILL 479          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_RABIT (Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 66/176 (37.50%), Postives = 86/176 (48.86%), Query Frame = -1
Query:  240 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMR-LHGAPMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDV-KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLL 761
            V++      G  LDL     +T T  + W+   LV  P I  K +EELD V+G+ R     D   LP++EA+I ET R     P  +P     D  + G+ I KG  V VN W    DP LW +P  F PERFL  S  V K    ++L FG G+R C G + G   +   LA LL
Sbjct:  304 VQVSDEKTVGIVLDLFGAGFDTVTTAISWSLMYLVTKPRIQRKIQEELDAVVGRARRPRFSDRPQLPYLEAVIMETFRHTSFLPFTIPHSTTRDTSLGGFYIPKGRCVFVNQWQNNHDPELWGDPEAFRPERFLTPSGAVDKALTEKVLLFGLGKRKCIGETIGRLEVFLFLATLL 479          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_MACMU (Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 66/185 (35.68%), Postives = 92/185 (49.73%), Query Frame = -1
Query:  216 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL--GKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 761
            ++L    +    LDL     +T T  + W+   LV NP +  K +EELD VIG+ R     D  +LP++EA I ET R     P  +P     D  + G+ I KG  V VN W I  D  LW NP+EF PERF+    +ID K    +++ FG G+R C G +     +   LA LL    + +P
Sbjct:  300 IQLSDEKIVNVVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFITPDGAID-KVLSEKVILFGLGKRKCIGETIARWEVFLFLAILLQRVEFSVP 483          
The following BLAST results are available for this feature:
BLAST of DT214588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP1A1_CANFA5.264e-2235.14Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 ... [more]
CP17A_SQUAC5.264e-2235.26Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
CP17A_PAPCY5.264e-2232.66Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP17A_PANTR5.264e-2232.66Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan tr... [more]
CP17A_MACMU5.264e-2232.66Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_MACFA5.264e-2232.66Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_CHICK5.264e-2235.84Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
CP1A1_RAT6.875e-2238.07Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1... [more]
CP1A1_RABIT6.875e-2237.50Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CY... [more]
CP1A1_MACMU6.875e-2235.68Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_03F04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0003d_C02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214588 ID=DT214588; Name=DT214588; organism=Citrus sinensis; type=EST; length=875bp
AGCTCAATTTTCACCAAAATGGATTATGAAATTATTACTTACGATAAGTT
TATTATTTTGGAAGCCATGTAAATTTATTATTTTGGCATCCACAATCACA
CATTGTAAAGATGGGGAGCAAGTCTTGGCTGAGCTACAACTTCAAGTGGA
ATTTTTTTCTGATTAGCAAGCTTAAAAACTTCCTCCATATTAAGCTCCTT
ATTGCTCATATTCCCAGGCAATTTCCATGTAAATCCATGCAAAAGATTAG
CCAGGCTTGATTGAATCACCTTCAGCCCATTACTGTAACCTGGACACATT
CTTCTCCCCGCTCCAAATGGCAGTAACTCAAAATCATTTCCTTTGACATC
AATTGATTTTCCAAGAAACCTCTCAGGGCAAAACTCATTGGGGTTTTCCC
ACAGAGCGGGGTCTCTCTCTATTGTCCACGTATTAACTAGTACTTGAGTG
CCTTTCAAGATGTCGTAGCCCGCAACTTTGCAATCTTCTCTAGCCATCCT
GGGCATAAGCATTGGAGCACCGTGCAAACGCATTGTTTCTTTAATTATGG
CCTCAATAAATGGGAGATTAACAATGTCTTTCTCTTCAAACCACCTTTCT
TTTCCAATTACTCTGTCTAGTTCTTCTCTTGCTTTATCTAAAATTTCCGG
ATTTTTCACTAATTCAGCGAAGGCCCATTCCAACATCAATGTTGAGGTCT
CAGTCGCTCCAGCTATTAGGTCCAATGTAAAACCTTTGACGCTGTGTCTG
TCCAGCTTAACTTCGAGAGTAGGATCATCAGCAAGCAGCAAAAGCACATC
CACCATATCTTTAGCCACATAATTATCGATCCCTTTTCGTCTAGCATTAT
GTTCATCAACCACCTGCTCTAAAAA
back to top