DT214588

Overview
NameDT214588
Unique NameDT214588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2C4_RABIT (Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CYP2C4 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19
Identity = 62/204 (30.39%), Postives = 106/204 (51.96%), Query Frame = -1
Query:  177 VKLDRHSVKGFTL--------DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMR-LHGAPMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEV 761
            +K+++ +   FTL        DL    TET++  L ++   L+K+PE+  + +EE++RVIG+ R    +D  ++P+ +A+I E  R +   P  +P     D K   Y I KGT ++ +  ++  D   + NP  F P  FL +S + K +D+  +PF AG+RMC G       +   L ++L  F  KL   +  K+L++  V
Sbjct:  269 IKMEKENNLEFTLGSLVIAVFDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSHMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVKFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNF--KLQSLVEPKDLDITAV 469          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19
Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = -1
Query:  186 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNM 722
            +L +  T+T+   L W    + K P I D+ +EE+ RVIG  +   E D  NLP+ +A+I ET RL    PM +P     D    GY I KGT V+    ++ +D + WE+PN F P  FL +       D   + F AGRR+C G       +     +LL  F +  P  ++  +L++
Sbjct:  306 NLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISRVIGSRQTLVE-DRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHFLDEQGGFVKRD-AFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTEDDLDL 483          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1B1_RAT (Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19
Identity = 59/190 (31.05%), Postives = 91/190 (47.89%), Query Frame = -1
Query:  204 LDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDV-KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKL----PGNMS 755
            LD   V     D+   + +T +  L W      + P++  + + ELD+V+G++R     D  NLP++ A + E+MR     P+ +P     +  V GY I K T V VN W++  DPA W NP +F P RFL K   + K     ++ F  G+R C G      ++   ++ L H   +K     P NMS
Sbjct:  315 LDLEDVPATITDIFGASQDTLSTALLWLLILFTRYPDVQARVQAELDQVVGRDRLPCMSDQPNLPYVMAFLYESMRFTSFLPVTLPHATTANTFVLGYYIPKNTVVFVNQWSVNHDPAKWSNPEDFDPARFLDKDGFINKALASSVMIFSVGKRRCIGEELSKTLLFLFISILAHQCNFKANQNEPSNMS 504          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A3_ONCMY (Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1a3 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19
Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = -1
Query:  240 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGA--PMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL---GKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLL 761
            +++    + G   DL     +T +  L WA   LV  PE  ++  +EL   +G  R     D +NLP +EA I E  R H +  P  +P    +D  + GY I K T V +N W +  DP LW+ P+ F P+RFL   G  ++ K    ++L FG G+R C G + G   +   LA LL
Sbjct:  305 IQVSDEKIVGIVNDLFGAGFDTISTALSWAVVYLVAYPETQERLHQELKEKVGMIRTPRLSDKINLPLLEAFILEIFR-HSSFLPFTIPHCTIKDTSLNGYFIPKDTCVFINQWQVNHDPELWKEPSSFNPDRFLSADGTELN-KLEGEKVLVFGMGKRRCIGEAIGRNEVYLFLAILL 481          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_HORSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus caballus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19
Identity = 62/199 (31.16%), Postives = 100/199 (50.25%), Query Frame = -1
Query:  138 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP--GNMSNKELNMEEVFKLANQKKIPLEV 722
            D+     ET+T +++W  A L+ +P++  K +EE+D+ +G  R     D   L  +EA I+E +R+   APML+P  A  D  +  + +  GT V++N W +  +   W  P+ F PERFL  +   +       LPFGAG R C G     + +    A LL  F  ++P  G + + E +   VF L +  K+ + V
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHDPQLKKKIQEEIDQNVGFSRTPTLSDRNRLLLLEATIREVLRIRPVAPMLIPHKALVDSSIGEFAVDDGTNVIINLWALHHNEKEWHQPDRFMPERFLDPTGSQLISPSLSYLPFGAGPRSCIGELLARQELFLFTAWLLQRFNLEVPDDGQLPSLEGHPTAVF-LIDSFKVKINV 495          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_BOVIN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos taurus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19
Identity = 54/171 (31.58%), Postives = 88/171 (51.46%), Query Frame = -1
Query:  216 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 722
            D+     ET+T +++W  A L+ +P +  + ++++D++IG  R     D   L  +EA I+E +R+   AP L+P  A  D  +    I KGT V+VN W +      W++P+ F PERFL  +   +       LPFGAG R C G     + +   ++ LL  F  ++P
Sbjct:  298 DIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDDIDQIIGFNRTPTISDRNRLVLLEATIREVLRIRPVAPTLIPHKAVIDSSIGDLTIDKGTDVVVNLWALHHSEKEWQHPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRFNLEIP 468          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_BISBI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison bison GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19
Identity = 54/171 (31.58%), Postives = 88/171 (51.46%), Query Frame = -1
Query:  216 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 722
            D+     ET+T +++W  A L+ +P +  + ++++D++IG  R     D   L  +EA I+E +R+   AP L+P  A  D  +    I KGT V+VN W +      W++P+ F PERFL  +   +       LPFGAG R C G     + +   ++ LL  F  ++P
Sbjct:  298 DIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDDIDQIIGFNRTPAISDRNRLVLLEATIREVLRIRPVAPTLIPHKAVIDSSIGDLTIDKGTDVVVNLWALHHSEKEWQHPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRFNLEIP 468          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2K4_ONCMY (Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2k4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.171e-19
Identity = 59/180 (32.78%), Postives = 88/180 (48.89%), Query Frame = -1
Query:  186 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNM 722
            +L    T+T+   L W    + K P I D+ +EE+ RVIG  +   E D  NLP+ +A+I ET RL   +PM +P     D    GY I KGT V+    ++ +D   WE+PN F P  FL +       D   + F AGRR+C G       +     +LL  F +  P  ++  +L++
Sbjct:  306 NLFGAGTDTTGTTLRWGLLLMAKYPHIQDQVQEEISRVIGSRQTLVE-DRKNLPYTDAVIHETQRLANISPMAVPHTTSRDVTFQGYFIKKGTSVIPLLMSVLQDDNEWESPNTFNPSHFLDEQGGFVKRD-AFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTEDDLDL 483          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP17A_CAPHI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra hircus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.171e-19
Identity = 62/199 (31.16%), Postives = 100/199 (50.25%), Query Frame = -1
Query:  138 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS-IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP--GNMSNKELNMEEVFKLANQKKIPLEV 722
            D+     ET+T +++W  A L+ +P +  + ++ +D+ IG  R     D   L  +EA I+E +R+   APML+P  A  D  +    I KGT V+VN W +  +   W+ P+ F PERFL  +   +       LPFGAG R C G     + +   ++ LL  F  ++P  G + + E N   V ++    K+ +EV
Sbjct:  298 DIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDSIDQNIGFNRTPTISDRNCLVLLEATIREVLRIRPVAPMLIPHKAIIDSSIGDLTIDKGTDVVVNLWALHHNEKEWQQPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRFNLEIPDDGKLPSLEGNPSLVLQI-KPFKVKIEV 495          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2F5_GORGO (Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=CYP2F5 PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19
Identity = 62/203 (30.54%), Postives = 101/203 (49.75%), Query Frame = -1
Query:  123 TLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPR 728
            T +L+ G TET    L +AF  L+K P++  + +EE+D V+G+ R    KD   +P+ +A+I E  R     PM +P     D    G+ I KGT ++    T+  DP+ +  P EF PE FL  +   K +    +PF AGRR+C G S     +   L  +L  F+ +  G  + K++++  +         P ++  +PR
Sbjct:  292 THNLLFGGTETVGTTLRYAFLALMKYPKVQARVQEEIDLVVGRARLPALKDRAAMPYTDAVIHEVQRFADIIPMSLPHRVTRDTAFRGFLIPKGTDIITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFKKSP-AFMPFSAGRRLCLGESLARMELFLYLTAILQSFSLQPLG--APKDIDLTPLSSGLGNLPRPFQLCLRPR 491          
The following BLAST results are available for this feature:
BLAST of DT214588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2C4_RABIT2.445e-1930.39Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CY... [more]
CP2K1_ONCMY3.193e-1932.78Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP1B1_RAT3.193e-1931.05Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1... [more]
CP1A3_ONCMY3.193e-1933.52Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1... [more]
CP17A_HORSE3.193e-1931.16Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus ... [more]
CP17A_BOVIN3.193e-1931.58Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos ta... [more]
CP17A_BISBI3.193e-1931.58Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison ... [more]
CP2K4_ONCMY4.171e-1932.78Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP17A_CAPHI4.171e-1931.16Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra ... [more]
CP2F5_GORGO5.447e-1930.54Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_03F04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0003d_C02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214588 ID=DT214588; Name=DT214588; organism=Citrus sinensis; type=EST; length=875bp
AGCTCAATTTTCACCAAAATGGATTATGAAATTATTACTTACGATAAGTT
TATTATTTTGGAAGCCATGTAAATTTATTATTTTGGCATCCACAATCACA
CATTGTAAAGATGGGGAGCAAGTCTTGGCTGAGCTACAACTTCAAGTGGA
ATTTTTTTCTGATTAGCAAGCTTAAAAACTTCCTCCATATTAAGCTCCTT
ATTGCTCATATTCCCAGGCAATTTCCATGTAAATCCATGCAAAAGATTAG
CCAGGCTTGATTGAATCACCTTCAGCCCATTACTGTAACCTGGACACATT
CTTCTCCCCGCTCCAAATGGCAGTAACTCAAAATCATTTCCTTTGACATC
AATTGATTTTCCAAGAAACCTCTCAGGGCAAAACTCATTGGGGTTTTCCC
ACAGAGCGGGGTCTCTCTCTATTGTCCACGTATTAACTAGTACTTGAGTG
CCTTTCAAGATGTCGTAGCCCGCAACTTTGCAATCTTCTCTAGCCATCCT
GGGCATAAGCATTGGAGCACCGTGCAAACGCATTGTTTCTTTAATTATGG
CCTCAATAAATGGGAGATTAACAATGTCTTTCTCTTCAAACCACCTTTCT
TTTCCAATTACTCTGTCTAGTTCTTCTCTTGCTTTATCTAAAATTTCCGG
ATTTTTCACTAATTCAGCGAAGGCCCATTCCAACATCAATGTTGAGGTCT
CAGTCGCTCCAGCTATTAGGTCCAATGTAAAACCTTTGACGCTGTGTCTG
TCCAGCTTAACTTCGAGAGTAGGATCATCAGCAAGCAGCAAAAGCACATC
CACCATATCTTTAGCCACATAATTATCGATCCCTTTTCGTCTAGCATTAT
GTTCATCAACCACCTGCTCTAAAAA
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