DT214588

Overview
NameDT214588
Unique NameDT214588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A2_PONAB (Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19
Identity = 57/150 (38.00%), Postives = 81/150 (54.00%), Query Frame = -1
Query:  288 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGA--PMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL---GKSIDVKGNDFELLPFGAGRRMCPG 722
            D+     +T T  + W+   LV  PEI  K ++ELD +IG+ R     D   LP+++A I ET R H +  P  +P     D  + G+ I K   V VN W +  DP LWE+P+EF PERFL   G +I+ K    +++ FG G+R C G
Sbjct:  313 DIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTMIGRGRRPRLSDRPQLPYLKAFILETFR-HSSFLPFTIPHSTTRDTTLNGFYIPKECCVFVNQWQVNHDPELWEDPSEFWPERFLTTDGTAIN-KPLSEKVMLFGMGKRRCIG 460          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_ONCMY (Cytochrome P450 1A1 OS=Oncorhynchus mykiss GN=cyp1a1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19
Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = -1
Query:  240 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGA--PMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL---GKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLL 761
            +++    + G   DL     +T +  L WA   LV  PEI ++  +EL   +G  R     D +NLP +EA I E  R H +  P  +P    +D  + GY I K T V +N W +  DP LW+ P+ F P+RFL   G  ++ K    ++L FG  +R C G + G   +   LA LL
Sbjct:  305 IQVSDEKIVGIVNDLFGAGFDTISTALSWAVVYLVAYPEIQERLHQELKEKVGMIRTPRLSDKINLPLLEAFILEIFR-HSSFLPFTIPHCTIKDTSLNGYFIPKDTCVFINQWQVNHDPELWKEPSSFNPDRFLSADGTELN-KLEGEKVLVFGMDKRRCIGEAIGRNEVYLFLAILL 481          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: C513C_DICDI (Probable cytochrome P450 513C1 OS=Dictyostelium discoideum GN=cyp513c1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19
Identity = 58/201 (28.86%), Postives = 102/201 (50.75%), Query Frame = -1
Query:  165 KLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDK-AREELDRVI-GKERWFEEKDIVNLPFIEAIIKETMRLHGAPML-MPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLA 758
            ++ ++++    +D++   T+T    L +A   LV N EI +K +R  +D +  G   +   K    +P++  ++KE  R++ A +L +P M  EDC++ G+ I KGTQ++ N ++  R  + W NPN F PER +   +       + + F  G R C G S     + +++A L   F +    N SN  LN +  F +A
Sbjct:  290 RITQNALISICIDVLIAGTDTVGQTLSFAIVALVNNAEIQEKLSRNIIDSMEKGDNHYSYSKYRNGIPYLALVVKEVFRMYPAGILGLPHMTSEDCEIQGHKIAKGTQIIQNIYSTHRSESFWPNPNNFIPERHIQNDVS------KSVHFAVGTRNCMGMSLSEAEVHTAMAELFGNFKFT---NPSNIPLNDQGTFSVA 481          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2D3_RAT (Cytochrome P450 2D3 OS=Rattus norvegicus GN=Cyp2d3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.114e-19
Identity = 56/173 (32.37%), Postives = 88/173 (50.87%), Query Frame = -1
Query:  216 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFE---LLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 722
            DL      T+++ L WA   ++ +P++  + ++E+D VIG+ R  E  D  ++PF  A+I E  R     PM +P     D +V G+ I KGT ++ N  ++ +D  +WE P  F PE FL    D +GN  +    +PF AGRR C G       +      LL  F++ +P
Sbjct:  304 DLFGAGMVTTSITLTWALLLMILHPDVQCRVQQEIDEVIGQVRHPEMADQAHMPFTNAVIHEVQRFADIVPMNLPHKTSRDIEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLRFHPEHFL----DAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVP 472          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2D1_RAT (Cytochrome P450 2D1 OS=Rattus norvegicus GN=Cyp2d1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.114e-19
Identity = 56/187 (29.95%), Postives = 94/187 (50.27%), Query Frame = -1
Query:  216 EVKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFE---LLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 764
            E   +  +++   +DL      T+   L WA   ++  P++  + ++E+D VIG+ R  E  D  ++P+  A+I E  R    AP+ +PR    D +V  + I KGT +++N  ++ +D  +WE P+ F PE FL    D +GN  +    +PF AGRR C G       +      LL  F++ +P
Sbjct:  290 ESSFNDENLRMVVVDLFTAGMVTTATTLTWALLLMILYPDVQRRVQQEIDEVIGQVRCPEMTDQAHMPYTNAVIHEVQRFGDIAPLNLPRFTSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPHRFHPEHFL----DAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVP 472          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP2A4_MOUSE (Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.114e-19
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = -1
Query:  222 TLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWK 728
            TL+L    TET +  L + F  L+K P+I  K  EE+DRVIG+ R  + +D + +P+ EA+I E  R     PM + R   +D K   + + KGT+V     ++ +DP  + NP +F P+ FL      K +D   +PF  G+R C G       +   L N++  F +K
Sbjct:  295 TLNLFFAGTETVSTTLRYGFLLLMKYPDIEAKVHEEIDRVIGRNRQPKYEDRMKMPYTEAVIHEIQRFADLIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKSD-AFVPFSIGKRYCFGEGLARMELFLFLTNIMQNFHFK 463          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1B1_MOUSE (Cytochrome P450 1B1 OS=Mus musculus GN=Cyp1b1 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.114e-19
Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = -1
Query:  201 LDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDV-KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSN 755
            LD   V     D+   + +T +  L W      + P++  + + ELD+V+G++R     D  NLP++ A + E+MR     P+ +P     +  V GY I K T V VN W++  DPA W NP +F P RFL K   + K     ++ F  G+R C G      ++   ++ L H   +K   N S+
Sbjct:  315 LDLEDVPATITDIFGASQDTLSTALLWLLILFTRYPDVQARVQAELDQVVGRDRLPCMSDQPNLPYVMAFLYESMRFSSFLPVTIPHATTANTFVLGYYIPKNTVVFVNQWSVNHDPAKWPNPEDFDPARFLDKDGFINKALASSVMIFSVGKRRCIGEELSKMLLFLFISILAHQCNFKANQNESS 501          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A2_BALAC (Cytochrome P450 1A2 OS=Balaenoptera acutorostrata GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 7.114e-19
Identity = 61/172 (35.47%), Postives = 84/172 (48.84%), Query Frame = -1
Query:  216 DLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGK--SIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLP 722
            D+ A   +  T  + W+   LV NPEI  K ++ELD VIG+ R     D   LP++EA I ET R     P  +P     D  + G+ I K   V +N W +  DP LW +P+EF PERFL    +   K    +++ FG G+R C G       I   LA LL    + +P
Sbjct:  313 DIFAAGFDPITTAISWSLLYLVTNPEIQRKIQQELDTVIGRARRPRLSDRSQLPYLEAFILETFRHSSFVPFTIPHSTIRDTTLNGFYIPKELCVFINQWQVNHDPKLWGDPSEFRPERFLTSHDTTISKTLSEKVMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVP 484          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CP1A1_DICLA (Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.114e-19
Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = -1
Query:  213 VKLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGA--PMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL---GKSIDVKGNDFELLPFGAGRRMCPG---YSNGLKVIQSSLANLLHGFTWKLPG 761
            V++    + G   DL     +T +  L W+   LV  PEI ++  +EL   +G +R     D  NLPF+EA I E  R H +  P  +P    +D  + GY I K T V +N W I  DP LW++P+ F P+RFL   G  ++ K    +++ FG G+R C G     NG+ +  + +   LH  T  LPG
Sbjct:  306 VQMSDEKIVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIEERLYQELKENVGLDRTPLLCDRPNLPFLEAFILEIFR-HSSFLPFTIPHCTSKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGTELN-KLEGEKVMVFGLGKRRCIGEVIARNGVFLFLAIIVQKLHFKT--LPG 492          
BLAST of DT214588 vs. ExPASy Swiss-Prot
Match: CPXN_ANASP (Probable cytochrome P450 110 OS=Anabaena sp. (strain PCC 7120) GN=cyp110 PE=3 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 9.291e-19
Identity = 53/171 (30.99%), Postives = 92/171 (53.80%), Query Frame = -1
Query:  231 VKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKAREELDRVIGKERWFEEKDIVNLPFIEAIIKETMRLHGA-PMLMPRMAREDCKVAGYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGF 740
            +K   L ++    ET+   + WAF +++KN  + +K ++ELDR+       E   I  LP++ A+ +ET+R++   P L PR+ +    +AGY +   T ++ + + I     L+ NP +F PERF    I+ + +  E +PFG G R C GY+  L  I+  +A +L  +
Sbjct:  251 LKDELLTILFAGHETTATTIAWAFYQILKNVNVQEKLQQELDRLGANPNPME---IAQLPYLTAVSQETLRMYPVLPTLFPRITKSSINIAGYQLEPDTTLMASIYLIHYREDLYPNPQQFRPERF----IERQYSPSEYIPFGGGSRRCLGYALALLEIKLVIATVLSNY 414          
The following BLAST results are available for this feature:
BLAST of DT214588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP1A2_PONAB5.447e-1938.00Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2... [more]
CP1A1_ONCMY5.447e-1933.52Cytochrome P450 1A1 OS=Oncorhynchus mykiss GN=cyp1... [more]
C513C_DICDI5.447e-1928.86Probable cytochrome P450 513C1 OS=Dictyostelium di... [more]
CP2D3_RAT7.114e-1932.37Cytochrome P450 2D3 OS=Rattus norvegicus GN=Cyp2d3... [more]
CP2D1_RAT7.114e-1929.95Cytochrome P450 2D1 OS=Rattus norvegicus GN=Cyp2d1... [more]
CP2A4_MOUSE7.114e-1933.53Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2... [more]
CP1B1_MOUSE7.114e-1930.48Cytochrome P450 1B1 OS=Mus musculus GN=Cyp1b1 PE=2... [more]
CP1A2_BALAC7.114e-1935.47Cytochrome P450 1A2 OS=Balaenoptera acutorostrata ... [more]
CP1A1_DICLA7.114e-1934.03Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp... [more]
CPXN_ANASP9.291e-1930.99Probable cytochrome P450 110 OS=Anabaena sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_03F04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0003d_C02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214588 ID=DT214588; Name=DT214588; organism=Citrus sinensis; type=EST; length=875bp
AGCTCAATTTTCACCAAAATGGATTATGAAATTATTACTTACGATAAGTT
TATTATTTTGGAAGCCATGTAAATTTATTATTTTGGCATCCACAATCACA
CATTGTAAAGATGGGGAGCAAGTCTTGGCTGAGCTACAACTTCAAGTGGA
ATTTTTTTCTGATTAGCAAGCTTAAAAACTTCCTCCATATTAAGCTCCTT
ATTGCTCATATTCCCAGGCAATTTCCATGTAAATCCATGCAAAAGATTAG
CCAGGCTTGATTGAATCACCTTCAGCCCATTACTGTAACCTGGACACATT
CTTCTCCCCGCTCCAAATGGCAGTAACTCAAAATCATTTCCTTTGACATC
AATTGATTTTCCAAGAAACCTCTCAGGGCAAAACTCATTGGGGTTTTCCC
ACAGAGCGGGGTCTCTCTCTATTGTCCACGTATTAACTAGTACTTGAGTG
CCTTTCAAGATGTCGTAGCCCGCAACTTTGCAATCTTCTCTAGCCATCCT
GGGCATAAGCATTGGAGCACCGTGCAAACGCATTGTTTCTTTAATTATGG
CCTCAATAAATGGGAGATTAACAATGTCTTTCTCTTCAAACCACCTTTCT
TTTCCAATTACTCTGTCTAGTTCTTCTCTTGCTTTATCTAAAATTTCCGG
ATTTTTCACTAATTCAGCGAAGGCCCATTCCAACATCAATGTTGAGGTCT
CAGTCGCTCCAGCTATTAGGTCCAATGTAAAACCTTTGACGCTGTGTCTG
TCCAGCTTAACTTCGAGAGTAGGATCATCAGCAAGCAGCAAAAGCACATC
CACCATATCTTTAGCCACATAATTATCGATCCCTTTTCGTCTAGCATTAT
GTTCATCAACCACCTGCTCTAAAAA
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