DT214535

Overview
NameDT214535
Unique NameDT214535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5318 contig Csv1_Contig5318:336..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.102e-22
Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            +KA+A+QPV+  +++SS++FQ Y  G+FDG+CGT  NH V  VGYG+ +     DY IVKNS G  WGE GY+++ RN   P GLC I   AS+P+K
Sbjct:  267 MKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTNLNHGVVVVGYGTENGR---DYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGIAMRASYPLK 360          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.102e-22
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            +KA+A+QPV+  I++SS++FQ Y  G+FDGSCGT  NH V  VGYG+ +     DY +VKNS G  WGE GY+++ RN   P GLC I   AS+P+K
Sbjct:  260 MKAVAHQPVTAVIDSSSREFQLYESGVFDGSCGTNLNHGVVVVGYGTENGR---DYWLVKNSRGITWGEAGYMKMARNIANPRGLCGIAMRASYPLK 353          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.206e-22
Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            ++A+ANQP+SV IEAS   FQ YS G+F G CGT  +H V  VGYG++   +   Y IVKNSWG +WGE GYIR++R      G C I   AS+PIK
Sbjct:  252 MQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTELDHGVAIVGYGATR--DGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYPIK 346          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.143e-22
Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = -1
Query:   76 ALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIKF 363
            A+  QPVSV ++A+   F+HYS GIF G CGT  +HAVT VGYG+      +DY IVKNSW   WGE GY+RI RN G   G C I  + S+P+K+
Sbjct:  253 AVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEG---GIDYWIVKNSWDTTWGEEGYMRILRNVG-GAGTCGIATMPSYPVKY 344          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.329e-22
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+A+QPVS+ +EA  +DFQHY  GIF G CGT  +H V   GYG+ +    +DY IV+NSWG    E GY+R++RN     GLC +    S+P+K
Sbjct:  142 KAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTEN---GMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPVK 234          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.329e-22
Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+A+QPVSV IEASS+ FQ Y  G+  G+CG   +H V  VGYGS+S     DY I++NSWG  WG+ GY++++RN   P G C I  + S+P K
Sbjct:  257 KAVAHQPVSVAIEASSQAFQLYKSGVMTGTCGISLDHGVVVVGYGSTSGE---DYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMMPSYPTK 349          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.714e-21
Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            ++ + NQPVSV  E+  + FQ Y GGIF+G CG   +HAVTA+GYG +        ++ KNSWGP WGE GYI+IKR +G   G C + K + FPIK
Sbjct:  123 IQGIGNQPVSVLHESKGRAFQLYKGGIFNGPCGYKNDHAVTAIGYGKAQ-------LLDKNSWGPNWGEKGYIKIKRASGKSEGTCGVYKSSYFPIK 212          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.545e-21
Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = -1
Query:   85 ALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 363
            A++NQP++  I+AS ++FQ+Y+GG+F G CGT  NHA+T +GYG  SS     Y IV+NSWG  WGEGGY+R+ R      G+C I     FP
Sbjct:  245 AVSNQPIAALIDAS-ENFQYYNGGVFSGPCGTSLNHAITIIGYGQDSS--GTKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGIAMAPLFP 334          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.630e-21
Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = -1
Query:   85 ALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 363
            A++NQP++  I+AS  +FQ+Y GG++ G CG   NHA+T +GYG  S      Y IV+NSWG  WG+GGY+RI+R+    GG+C I     FP
Sbjct:  124 AVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRDS------YWIVRNSWGSSWGQGGYVRIRRDVSHSGGVCGIAMSPLFP 210          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 99.7525 bits (247), Expect = 4.630e-21
Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = -1
Query:   76 ALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIKF 363
            A+  QPVSV ++A+   F+ YS GIF G CGT  +HAVT VGYG+      +DY IVKNSW   WGE GY+RI RN G   G C I  + S+P+K+
Sbjct:  253 AVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEG---GIDYWIVKNSWDTTWGEEGYMRILRNVG-GAGTCGIATMPSYPVKY 344          
The following BLAST results are available for this feature:
BLAST of DT214535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CPR4_ARATH1.102e-2250.52Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH1.102e-2251.55Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSP_HEMSP3.206e-2252.58Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
ACTN_ACTDE7.143e-2252.08Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CYSPL_SOLLC9.329e-2247.92Low-temperature-induced cysteine proteinase (Fragm... [more]
CPR1_ARATH9.329e-2250.00Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
MEX2_JACME2.714e-2149.48Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
BROM1_ANACO3.545e-2149.46Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
MDO1_PSEMR4.630e-2147.31Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
ACTN_ACTCH4.630e-2151.04Actinidain OS=Actinidia chinensis PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13B10_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-13B10-C20-1-6.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214535 ID=DT214535; Name=DT214535; organism=Citrus sinensis; type=EST; length=369bp
CATTCATTGAANGCACAAGATATTATTTTTAGTCATAACTGAAGGCAAAC
ATACTATACACAGTTAAGTGGTCTTGAACTTGATGGGGAATGAAGCCAAC
TTGTTGATAGCACATAGGCCACCAGGTAATCCGGTGTTTCTCTTAATCCT
GATGTAGCCTCCCTCTCCCCATTTGGGTCCCCATGAATTTTTGACAATTA
TGTAATCCACTGCCTCCGGTGAAGAAGAAGATCCATACCCAACTGCTGTC
ACTGCGTGATTGGGATATGTTCCACAGGAGCCGTCGAATATACCCCCGCT
GTAATGTTGGAAATCCTTGCTAGAAGCCTCAATGCCGACGCTAACGGGCT
GGTTCGCCAGTGCTTTCAA
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