DT214506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: RCO1_NEUCR (Transcriptional repressor rco-1 OS=Neurospora crassa GN=rco-1 PE=4 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = -2 Query: 270 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT--STKVLKTEE 509 I S+ SPDG+Y+A+G ED I +WD+ S GH +++L +S +G +ASGS D TV+LWD+ T +T VL E+ Sbjct: 347 IRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVLSIED 428
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 42/130 (32.31%), Postives = 62/130 (47.69%), Query Frame = -2 Query: 150 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 539 +R +GH++ I SL P G ++ASG D I +WD+ C+ HT V L +S +G LAS + D TVKLWD+T + + SG PV ++F L A+G+ +T Sbjct: 98 LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSG---------------PVNVVEFHPSEYLLASGSSDRT 212
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: GBLP_DANRE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Danio rerio GN=gnb2l1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 35/109 (32.11%), Postives = 57/109 (52.29%), Query Frame = -2 Query: 210 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPV 536 R GH + + +S DG++ SG DGT+ +WDL +G +GHT V ++A+S + + SGS D T+KLW+ T ++ S T + ++ P S P+ Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLGVCKYTIQDDSHTEWVSCVRFSPNSSNPI 164
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 35/83 (42.17%), Postives = 46/83 (55.42%), Query Frame = -2 Query: 276 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 524 GHR+ I + P M S ED TI +WD +G L GHT V +A+ +G LLAS SAD ++KLWD S + +KT Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKT 188
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 36/79 (45.57%), Postives = 44/79 (55.70%), Query Frame = -2 Query: 297 IFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 533 I GHR+ I S+ P M S ED TI +WD SG L GHT+ V + + G+LLAS SAD T+KLWD T Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQT 179
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 39/129 (30.23%), Postives = 62/129 (48.06%), Query Frame = -2 Query: 150 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 536 R GH+ I +A S D + + S +D TI +WD+ SG+ V L GH V+ ++++ + +L+ SGS D V++WDV T K + S PV + F+R L +G+ T Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTG---------------ECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGT 195
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: GBLP_RAT (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Rattus norvegicus GN=Gnb2l1 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = -2 Query: 210 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPV 536 R GH + + +S DG++ SG DGT+ +WDL +G +GHT V ++A+S + + SGS D T+KLW+ T +++S + + ++ P S P+ Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: GBLP_PIG (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Sus scrofa GN=GNB2L1 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = -2 Query: 210 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPV 536 R GH + + +S DG++ SG DGT+ +WDL +G +GHT V ++A+S + + SGS D T+KLW+ T +++S + + ++ P S P+ Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: GBLP_MOUSE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Mus musculus GN=Gnb2l1 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = -2 Query: 210 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPV 536 R GH + + +S DG++ SG DGT+ +WDL +G +GHT V ++A+S + + SGS D T+KLW+ T +++S + + ++ P S P+ Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: GBLP_MACFA (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Macaca fascicularis GN=GNB2L1 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = -2 Query: 210 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPV 536 R GH + + +S DG++ SG DGT+ +WDL +G +GHT V ++A+S + + SGS D T+KLW+ T +++S + + ++ P S P+ Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164 The following BLAST results are available for this feature:
BLAST of DT214506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214506 ID=DT214506; Name=DT214506; organism=Citrus sinensis; type=EST; length=540bpback to top |