FC871227

Overview
NameFC871227
Unique NameFC871227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length448
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT14_ORYSI (Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. indica GN=PHT1-4 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11
Identity = 38/81 (46.91%), Postives = 43/81 (53.09%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A ++             GV+ +L  L G N +G  FTFLVPESKGKSL
Sbjct:  428 EIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAAQSTDASKTDAGYPPGIGVRNSLFFLAGCNVIGFFFTFLVPESKGKSL 508          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT13_ORYSJ (Probable inorganic phosphate transporter 1-3 OS=Oryza sativa subsp. japonica GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11
Identity = 38/79 (48.10%), Postives = 42/79 (53.16%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-----------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EI+PARLRSTCH               FGFLY A              G++ AL +L G NFLGML T LVPESKG SL
Sbjct:  432 EIYPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQDPHKPEAGYKPGIGIRNALFVLAGTNFLGMLMTLLVPESKGMSL 510          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT18_ORYSJ (Probable inorganic phosphate transporter 1-8 OS=Oryza sativa subsp. japonica GN=PHT1-8 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11
Identity = 38/79 (48.10%), Postives = 42/79 (53.16%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-----------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A              GV+ +L +L G N LG + TFLVPESKGKSL
Sbjct:  435 EIFPARLRSTCHGISAAAGKAGAIIGSFGFLYAAQDPHKPDAGYKPGIGVRNSLFVLAGCNLLGFICTFLVPESKGKSL 513          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT11_ORYSJ (Inorganic phosphate transporter 1-1 OS=Oryza sativa subsp. japonica GN=PHT1-1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11
Identity = 37/79 (46.84%), Postives = 41/79 (51.90%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-----------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EI+PARLRSTCH               FGFLY A              G+K AL +L G NFLG + T LVPESKG SL
Sbjct:  430 EIYPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQDQHKPEPGYPRGIGIKNALFVLAGTNFLGTIMTLLVPESKGMSL 508          
The following BLAST results are available for this feature:
BLAST of FC871227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PHT14_ORYSI1.398e-1146.91Probable inorganic phosphate transporter 1-4 OS=Or... [more]
PHT13_ORYSJ1.398e-1148.10Probable inorganic phosphate transporter 1-3 OS=Or... [more]
PHT18_ORYSJ2.385e-1148.10Probable inorganic phosphate transporter 1-8 OS=Or... [more]
PHT11_ORYSJ4.069e-1146.84Inorganic phosphate transporter 1-1 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DE01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871227 ID=FC871227; Name=FC871227; organism=Citrus sinensis; type=EST; length=448bp
TGAGATTTTCCCGGCGAGGCTAAGGTCAACTTGCCATGGCATATCAGCTG
CATCTGGCAAAGCGGGGGCCATTGTGGGTGCATTCGGGTTCTTGTACTTA
GCAGACACAAGTGGGGTGAAAAAAGCACTCCTAATTCTCGGTGGAGCCAA
CTTCTTAGGCATGTTGTTTACGTTCTTGGTACCGGAATCAAAGGGAAAAT
CATTGGAAGAAATGTCAGGTGAAGCTGAGGAAGAGAAAGGGACAACAGCA
ACAGTTCCAGTTTAAAATTAGGCCTTTGCATAGCTTAGTAGTAATATTTA
TGTTTCCTGTTTTAGCATTTACTTTTTACAGCACTATAAAAAGCTTTTAG
TGCTTGGACTTTGTTCTAAGTTGTACTTACGAGGCTGCCTTAAACTTTTC
ATATTGCAATCGAAGAATAAGGGAGTATTTTGGTTGCATGTTATTTGT
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