FC871221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_SALCH (Malate dehydrogenase OS=Salmonella choleraesuis GN=mdh PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 241 VEAK G GSATLSM AAA+F + +R L+G+ GV+ECAYV FF+ + LG+ G+EE S+G L+ +E+ L+ Sbjct: 214 VEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD 293
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_SALA4 (Malate dehydrogenase OS=Salmonella agona (strain SL483) GN=mdh PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 241 VEAK G GSATLSM AAA+F + +R L+G+ GV+ECAYV FF+ + LG+ G+EE S+G L+ +E+ L+ Sbjct: 214 VEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD 293
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_PHOPR (Malate dehydrogenase OS=Photobacterium profundum GN=mdh PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGL 238 VEAK G GSATLSM AA +F + +R L+G+ G++ECAYV FFA V LG+ G+EE+ G L+ +E+ L Sbjct: 214 VEAKAGGGSATLSMGQAAYRFGLSLVRALQGEQGIVECAYVEGDGKHARFFAQPVLLGKDGVEEVIDYGKLSTFEQEAL 292
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_SHEHH (Malate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=mdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYE 226 VEAK G GSATLSM AA +F + +RGL+G+A V+ECAYV FFA V LG+ GIE++ + G ++ +E Sbjct: 214 VEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHTEFFAQPVVLGKNGIEQVLAYGEVSAFE 288
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_SERP5 (Malate dehydrogenase OS=Serratia proteamaculans (strain 568) GN=mdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 241 VEAK G GSATLSM AAA+F + +R L+G+ GV+ECAYV FFA + LG+ G+EE +G L+ +E+ L+ Sbjct: 214 VEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGKYARFFAQPLVLGKNGVEERKDIGTLSAFEQKALD 293
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_EDWI9 (Malate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=mdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 241 VEAK G GSATL+M AAA+FA + +R ++GD V+EC YV S FFA + LG+AG+ + S+G L+ +E+ LE Sbjct: 214 VEAKAGGGSATLAMGQAAARFALSLVRAMQGDENVVECGYVESDGEYARFFAQPLLLGKAGLVQRLSIGTLSAFEQDALE 293
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_ALISL (Malate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=mdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 241 VEAK G GSATLSM AA +F + ++ L G+ GV+ECAYV FFA + LG+ G+EEI G L+ +E+ L+ Sbjct: 214 VEAKAGGGSATLSMGQAACRFGLSLVKALSGEKGVVECAYVEGNGEHARFFAQPILLGKNGVEEIQHYGELSTFEQDALD 293
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_SHESW (Malate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=mdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYE 226 VEAK G GSATLSM AA +F + +RGL+G+A V+ECAYV FFA V LG+ GIE++ G ++ +E Sbjct: 214 VEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFE 288
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_SHESH (Malate dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=mdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYE 226 VEAK G GSATLSM AA +F + +RGL+G+ VIECAYV FFA + LG+ G+E + + G ++E+E Sbjct: 214 VEAKAGGGSATLSMGQAACRFGLSLVRGLQGEENVIECAYVDGGSEHADFFAQPILLGKNGVESVLAYGEVSEFE 288
BLAST of FC871221 vs. ExPASy Swiss-Prot
Match: MDH_SHEPW (Malate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=mdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 2 VEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYE 226 VEAK G GSATLSM AA +F + +RGL+G+A V+ECAYV FFA V LG+ G+E++ + G ++ +E Sbjct: 214 VEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVVLGKNGVEQVLAYGDVSAFE 288 The following BLAST results are available for this feature:
BLAST of FC871221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871221 ID=FC871221; Name=FC871221; organism=Citrus sinensis; type=EST; length=592bpback to top |