EY676899

Overview
NameEY676899
Unique NameEY676899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_PELTS (tRNA modification GTPase mnmE OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mnmE PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.768e-24
Identity = 61/159 (38.36%), Postives = 93/159 (58.49%), Query Frame = 3 
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            P+  TREDVVE+ CHG  V LR+VL   L  GA LA+PGEF+ RAFLNGRLDL+QAE+V  +I              ++G  S  V  ++ + + LL ++EA +DF +D++    +  ++     + ++++  +  A   K+ + G+   I GRPNVGK
Sbjct:   75 PRTYTREDVVEINCHGGIVPLRKVLELALANGARLAEPGEFSKRAFLNGRLDLAQAESVIDIIRSKTEAGLRVAVSQLRGDLSRKVEDLQGRLLGLLAQVEANIDFPEDDLEEATVEDILRSGEDLIEEIKEIVRRAEAGKIYREGISTVIIGRPNVGK 233
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_HELMI (tRNA modification GTPase mnmE OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=mnmE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.310e-24
Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            V P+  T EDVVE  CHG  V +R  L A L AGA LA+PGEFT RAFL GRLDL+QAE + ++I              ++G  S  +  VR   + LL  +EA +DF ++++P +    +   +  + + + + +E +   ++L+ G +  I GRPNVGK
Sbjct:   75 VAPRTFTTEDVVEFHCHGGSVPVRETLGAVLRAGARLAEPGEFTRRAFLGGRLDLAQAEAIIEVIRAKTRDGLGAAVSQLEGQLSRRIRKVRDDLLALLAHLEAMIDFPEEDLPDIGSERICTDLMQIQRQIGDMLERSRTGRVLREGWRTVIVGRPNVGK 235
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRPM (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M28 GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRPG (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRPF (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRPD (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRPC (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRP8 (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M18 GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRP6 (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M6 GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
[Close]
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_STRP3 (tRNA modification GTPase mnmE OS=Streptococcus pyogenes serotype M3 GN=mnmE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query:   12 VGPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            + PK  TRE+VVE+  HG       +L+  +  GA +A+PGEFT RAFLNGR+DL+QAE V  +I              + G  S L+   R + +  L ++E  +D+   D++  +   L+ +K       +EN + TA   K+L+ GL  AI GRPNVGK
Sbjct:   76 LAPKTFTRENVVEINTHGGIAVTNEILQLLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMTIAVKQLDGSLSQLINDTRQEILNTLAQVEVNIDYPEYDDVEEMTTALLREKTQEFQSLLENLLRTAKRGKILREGLSTAIIGRPNVGK 237
The following BLAST results are available for this feature:
BLAST of EY676899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MNME_PELTS1.768e-2438.36tRNA modification GTPase mnmE OS=Pelotomaculum the... [more]
MNME_HELMI2.310e-2437.89tRNA modification GTPase mnmE OS=Heliobacterium mo... [more]
MNME_STRPM3.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]
MNME_STRPG3.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]
MNME_STRPF3.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]
MNME_STRPD3.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]
MNME_STRPC3.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]
MNME_STRP83.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]
MNME_STRP63.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]
MNME_STRP33.016e-2437.04tRNA modification GTPase mnmE OS=Streptococcus pyo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-D03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676899 ID=EY676899; Name=EY676899; organism=Citrus sinensis; type=EST; length=983bp
CCACGCGTCCGGTTGGCCCCAAGATCCTCACCCGTGAAGATGTGGTTGAG
CTTCAATGTCACGGCCCTGAAGTGTGTCTGCGCCGTGTGTTAAGAGCTTG
TTTAGAAGCTGGGGCGACCCTTGCTCAACCAGGCGAGTTCACTCTCCGCG
CCTTTCTCAATGGCCGCTTAGACCTATCTCAAGCTGAAAATGTTGAAAAG
TTAATTTCAGCAAAGTCTGTGGCTGCTGCAGATGCAGCTTTGGCAGGAAT
TCAGGGGGGCTTCTCTTCTTTGGTCACGTCAGTGAGAGCGAAGTGCATCG
AGTTGCTTACTGAGATTGAGGCTCGTTTAGATTTTGATGATGAGATGCCT
CCTCTCAATTTAAATCTGGTTATGGATAAAATACACGCAATGTCACAAGA
TGTGGAAAATGCCATGGAGACTGCCAATTATGACAAACTTCTGCAATCTG
GCTTACAAATAGCAATTGGCGGGCGACCAAATGTTGGGAAGTCTAGCCTT
CTTAATGCTTTGGAGCAAAATTGAGAGAACAATAGTTTACAAGAAAATTG
CCGGTACTACTCAAAAATGTCGTTGAAACCAATGGAAACATTATGTGGGT
GGACCTGGGGAAACTTCCTTGAAACCGCAGGGCTTAAAAAAAACTGAAAA
AAATTTGGGGAAAAAAATTGGTGGGGAAAAAGATCTGAAAACAATAACCT
TGGGGGGGGGGAGAGTTATATAAATAGAAAAAGGAGGGGGCAACTTAGAT
GGGTGGAATCTTTCAAAAAAAAAACACCAAACCTCTTATTAAAAAAATTA
CAATGCCCAAATAAAAAAAAGCTCCGCGGGGGACTCTCTCACCCCCCCCG
AGGAGTATTTCATGTGAAAATCAAGCAAAAAAAAGAAGAAGGGGGGCACC
CCCCATCATCACTAAACAACAAAGAAAAGGGGAGAAAAAAAAAGACACGC
GGAGCCAAATAAATTTTTCCGCACGAACAGAGA
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