EY676899

Overview
NameEY676899
Unique NameEY676899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_LISMF (tRNA modification GTPase mnmE OS=Listeria monocytogenes serotype 4b (strain F2365) GN=mnmE PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.002e-27
Identity = 66/160 (41.25%), Postives = 96/160 (60.00%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            P+  TREDVVE+  HG  V + RVL+  L  GA LA+PGEFT RAFLNGR+DLSQAE V  LI              + G  S L+ ++R + ++ L ++E  +D+   D++  +   ++++K   +   VE  ++TA+  K+L+ GL  AI GRPNVGK
Sbjct:   73 PRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILREGLATAIIGRPNVGK 232          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_LISIN (tRNA modification GTPase mnmE OS=Listeria innocua GN=mnmE PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.002e-27
Identity = 66/160 (41.25%), Postives = 96/160 (60.00%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            P+  TREDVVE+  HG  V + RVL+  L  GA LA+PGEFT RAFLNGR+DLSQAE V  LI              + G  S L+ ++R + ++ L ++E  +D+   D++  +   ++++K   +   VE  ++TA+  K+L+ GL  AI GRPNVGK
Sbjct:   73 PRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILREGLATAIIGRPNVGK 232          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_BACA2 (tRNA modification GTPase mnmE OS=Bacillus amyloliquefaciens (strain FZB42) GN=mnmE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.308e-27
Identity = 65/160 (40.62%), Postives = 96/160 (60.00%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            P+  TREDV+E+ CHG  V + +VL+  L  GA LA+PGEFT RAFLNGR+DLSQAE V  LI              ++G  S+LV  +R + +E L  +E  +D+   D++  +   L+++K   + +++E  + T+   K+L+ GL   I GRPNVGK
Sbjct:   75 PRTFTREDVIEINCHGGIVTVNQVLQLALREGARLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAMNQMEGRLSALVRRLRDELLETLAHVEVNIDYPEYDDVEEMTHQLLVEKASGVKKEIEALLRTSEQGKILREGLSTVIIGRPNVGK 234          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_LISMO (tRNA modification GTPase mnmE OS=Listeria monocytogenes GN=mnmE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.709e-27
Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            P+  TREDVVE+  HG  V + RVL+  L  GA LA+PGEFT RAFLNGR+DLSQAE V  LI              + G  S L+ ++R + ++ L ++E  +D+   D++  +   ++++K   +   VE  + TA+  K+L+ GL  AI GRPNVGK
Sbjct:   73 PRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLRTASQGKILREGLATAIIGRPNVGK 232          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_BACHD (tRNA modification GTPase mnmE OS=Bacillus halodurans GN=mnmE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.709e-27
Identity = 63/159 (39.62%), Postives = 96/159 (60.38%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFDD-EMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            P+  TREDV+E+ CHG  V + RVL+  L  GA LA+PGEFT RAFLNGR+DLSQAE V  LI              ++G  S+ ++S+R   +E +  +E  +D+ + +   + L+++ D+   + ++++  + TA   K+L+ GL   I GRPNVGK
Sbjct:   75 PRTFTREDVIEINCHGGLVSVNRVLQLVLNHGARLAEPGEFTKRAFLNGRIDLSQAEGVIDLIRAKTDRAMNVALKQVEGRLSTKISSLRQALLETVAHVEVNIDYPEYDAETMTLDMLKDRAQFVRKEIDKLLMTAQQGKILREGLSTVIIGRPNVGK 233          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_LYSSC (tRNA modification GTPase mnmE OS=Lysinibacillus sphaericus (strain C3-41) GN=mnmE PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.232e-27
Identity = 66/161 (40.99%), Postives = 96/161 (59.63%), Query Frame = 3
Query:   15 GPKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            GPK  TREDVVE+ CHG  V + RVL+  L  GA LA+PGEFT RAFLNGR+DLSQAE V  LI              + G  S L+  +R   +E L ++E  +D+   D++  + + ++++K   +  ++   ++T++  K+L+ GL   I GRPNVGK
Sbjct:   76 GPKTFTREDVVEINCHGGLVSVNRVLQLALTNGARLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVALGQMDGKLSRLIGDLRQALLETLAQVEVNIDYPEYDDVEEMTVPVLVEKCTWVRDEIIKLLQTSSQGKILREGLSTVILGRPNVGK 236          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_GEOTN (tRNA modification GTPase mnmE OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mnmE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.915e-27
Identity = 68/160 (42.50%), Postives = 91/160 (56.88%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            PK  TREDVVE+ CHG  V + RVL+  L  GA LA+PGEFT RAFLNGR+DLSQAE V  LI              ++G  S L+  +R   +E L  +E  +D+   D++  +   L+ +K   +   +E  + TA   K+L+ GL   I GRPNVGK
Sbjct:   78 PKTFTREDVVEINCHGGFVSVNRVLQLVLANGARLAEPGEFTKRAFLNGRIDLSQAEAVIDLIRAKTDRAMNVALQQMEGRLSKLIRELRQTILETLAHVEVNIDYPEYDDVEEMTPRLLKEKAEYVRGQIEKLLSTATQGKILREGLATVIIGRPNVGK 237          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_BACCN (tRNA modification GTPase mnmE OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=mnmE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.915e-27
Identity = 64/160 (40.00%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            PK  TRED+VE+ CHG  V + +VL+  L  G  LA+PGEFT RAFLNGR+DLSQAE V  LI              ++G  S L+  +R + +E L  +E  +D+   D++  +   ++++K   +  ++E  +ET+   K+L+ G+  AI GRPNVGK
Sbjct:   74 PKTFTREDIVEVNCHGGLVSVNKVLQLILAQGVRLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQEILETLAHVEVNIDYPEYDDVEEMTHRILIEKATHVQNEIEKILETSKQGKILREGIATAIIGRPNVGK 233          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_LACLM (tRNA modification GTPase mnmE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=mnmE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.972e-27
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            PK  TRED+VE+  HG     + +L+  L  GA LA+PGEFT RAFLNGR+DL+QAE+V  LI              + G  S ++ ++R + +E L ++E  +D+   D++  +   ++++K     Q +EN + TA   K+L+ GL+ AI GRPNVGK
Sbjct:   76 PKTFTREDIVEINTHGGIAVTQEILQLLLRNGARLAEPGEFTKRAFLNGRIDLAQAESVMDLIRAKTDKAANIAVKQLDGSLSKMINNIRQEILESLAQVEVNIDYPEYDDVETMTSQMLLEKTAHFEQLLENLLSTAKRGKILREGLKTAIIGRPNVGK 235          
BLAST of EY676899 vs. ExPASy Swiss-Prot
Match: MNME_LACLA (tRNA modification GTPase mnmE OS=Lactococcus lactis subsp. lactis GN=mnmE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.972e-27
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   18 PKILTREDVVELQCHGPEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENAMETANYDKLLQSGLQIAIGGRPNVGK 491
            PK  TRED+VE+  HG     + +L+  L  GA LA+PGEFT RAFLNGR+DL+QAE+V  LI              + G  S ++ ++R + +E L ++E  +D+   D++  +   ++++K     Q +EN + TA   K+L+ GL+ AI GRPNVGK
Sbjct:   76 PKTFTREDIVEINTHGGIAVTQEILQLLLRNGARLAEPGEFTKRAFLNGRIDLAQAESVMDLIRAKTDKAANIAVKQLDGSLSKMINNIRQEILESLAQVEVNIDYPEYDDVETMTSQMLLEKTAHFEQLLENLLSTAKRGKILREGLKTAIIGRPNVGK 235          
The following BLAST results are available for this feature:
BLAST of EY676899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MNME_LISMF1.002e-2741.25tRNA modification GTPase mnmE OS=Listeria monocyto... [more]
MNME_LISIN1.002e-2741.25tRNA modification GTPase mnmE OS=Listeria innocua ... [more]
MNME_BACA21.308e-2740.63tRNA modification GTPase mnmE OS=Bacillus amyloliq... [more]
MNME_LISMO1.709e-2741.25tRNA modification GTPase mnmE OS=Listeria monocyto... [more]
MNME_BACHD1.709e-2739.62tRNA modification GTPase mnmE OS=Bacillus halodura... [more]
MNME_LYSSC2.232e-2740.99tRNA modification GTPase mnmE OS=Lysinibacillus sp... [more]
MNME_GEOTN2.915e-2742.50tRNA modification GTPase mnmE OS=Geobacillus therm... [more]
MNME_BACCN2.915e-2740.00tRNA modification GTPase mnmE OS=Bacillus cereus s... [more]
MNME_LACLM4.972e-2739.38tRNA modification GTPase mnmE OS=Lactococcus lacti... [more]
MNME_LACLA4.972e-2739.38tRNA modification GTPase mnmE OS=Lactococcus lacti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-D03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676899 ID=EY676899; Name=EY676899; organism=Citrus sinensis; type=EST; length=983bp
CCACGCGTCCGGTTGGCCCCAAGATCCTCACCCGTGAAGATGTGGTTGAG
CTTCAATGTCACGGCCCTGAAGTGTGTCTGCGCCGTGTGTTAAGAGCTTG
TTTAGAAGCTGGGGCGACCCTTGCTCAACCAGGCGAGTTCACTCTCCGCG
CCTTTCTCAATGGCCGCTTAGACCTATCTCAAGCTGAAAATGTTGAAAAG
TTAATTTCAGCAAAGTCTGTGGCTGCTGCAGATGCAGCTTTGGCAGGAAT
TCAGGGGGGCTTCTCTTCTTTGGTCACGTCAGTGAGAGCGAAGTGCATCG
AGTTGCTTACTGAGATTGAGGCTCGTTTAGATTTTGATGATGAGATGCCT
CCTCTCAATTTAAATCTGGTTATGGATAAAATACACGCAATGTCACAAGA
TGTGGAAAATGCCATGGAGACTGCCAATTATGACAAACTTCTGCAATCTG
GCTTACAAATAGCAATTGGCGGGCGACCAAATGTTGGGAAGTCTAGCCTT
CTTAATGCTTTGGAGCAAAATTGAGAGAACAATAGTTTACAAGAAAATTG
CCGGTACTACTCAAAAATGTCGTTGAAACCAATGGAAACATTATGTGGGT
GGACCTGGGGAAACTTCCTTGAAACCGCAGGGCTTAAAAAAAACTGAAAA
AAATTTGGGGAAAAAAATTGGTGGGGAAAAAGATCTGAAAACAATAACCT
TGGGGGGGGGGAGAGTTATATAAATAGAAAAAGGAGGGGGCAACTTAGAT
GGGTGGAATCTTTCAAAAAAAAAACACCAAACCTCTTATTAAAAAAATTA
CAATGCCCAAATAAAAAAAAGCTCCGCGGGGGACTCTCTCACCCCCCCCG
AGGAGTATTTCATGTGAAAATCAAGCAAAAAAAAGAAGAAGGGGGGCACC
CCCCATCATCACTAAACAACAAAGAAAAGGGGAGAAAAAAAAAGACACGC
GGAGCCAAATAAATTTTTCCGCACGAACAGAGA
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