EY676889

Overview
NameEY676889
Unique NameEY676889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_THEM4 (Chaperone protein dnaJ OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.450e-13
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGVS +++ EEIR+AY+KL  +WHPDR  +   L   A+ KF+EIQEAY VLSD  KR +YD
Sbjct:    6 YYEILGVSRNATQEEIRQAYKKLIKKWHPDRNYENKKL---AEEKFKEIQEAYEVLSDPEKRAMYD 68          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_THET2 (Chaperone protein dnaJ OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.612e-12
Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG-LYDPXXXXXXGFSDFVQEMLSLMAEARK---EDKSYSME-ELQTM 398
            YY++LGVS  +S EEI++AYR+LA+++HPDR         +A+ +F+EI EAY+VLSD +KR  YD G L  P       F  F QE+  +    R    ED    +E ELQ +
Sbjct:    4 YYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDK----EAEERFKEINEAYAVLSDPKKRAAYDRGHLEAPEYRPEDLFDLFFQEVFGVRGHRRPPRGEDLEAEVEVELQDL 113          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.612e-12
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 320
            YY +LGVS ++S EEIR+AY++L  +WHPDR  +      +A+ KF+EIQEAY VLSD  KR +YD     G   P      GF  F
Sbjct:    6 YYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNRK---EAEEKFKEIQEAYEVLSDPEKRAMYDRFGYVGDVPPNAGSGGGFGGF 89          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.612e-12
Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 3
Query:   60 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAGLYDPXXXXXXGFSDFVQE 329
            V   YY +L V  ++S EEI++AYRKLA+++HPDR    P    +A+ KF+ I EAY VLSDE KR LYD   Y        GFS F Q+
Sbjct:    2 VDIDYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNP----EAEEKFKLINEAYQVLSDEEKRALYDQ--YGKAGLENQGFSGFNQK 85          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGE (Chaperone protein dnaJ OS=Mycoplasma genitalium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.612e-12
Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRW-TKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLG+S ++S ++I+RA+RKLAMQ+HPDR   +  +   + + KF+E+ EAY VLSDE KR LYD
Sbjct:    8 YYEVLGISKNASSQDIKRAFRKLAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLSDEEKRKLYD 74          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ1_THET8 (Chaperone protein dnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.612e-12
Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG-LYDPXXXXXXGFSDFVQEMLSLMAEARK---EDKSYSME-ELQTM 398
            YY++LGVS  +S EEI++AYR+LA+++HPDR         +A+ +F+EI EAY+VLSD +KR  YD G L  P       F  F QE+  +    R    ED    +E ELQ +
Sbjct:    4 YYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDK----EAEERFKEINEAYAVLSDPKKRAAYDRGHLEAPEYRPEDLFDLFFQEVFGVRGHRRPPRGEDLEAEVEVELQDL 113          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.105e-12
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  +SS ++I++AYR+LA++WHPD   K P    +A+ +F+E+ EAY VLSD +KR +YD
Sbjct:    4 YYDVLGVQRNSSPDDIKKAYRRLALKWHPD---KNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYD 66          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJ6A_XENLA (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-A PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.105e-12
Identity = 33/66 (50.00%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  ++S ++I++AYR+LA++WHPD   K P    +A+ +F+E+ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRNASADDIKKAYRRLALKWHPD---KNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYD 66          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.105e-12
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LG+S  SSVE+I++ YRKLA+Q+HPDR  K P     A+ KF+EI EAY+VLSD  KR  YD
Sbjct:    7 YYEILGLSKDSSVEDIKKTYRKLALQYHPDR-NKEPG----AEEKFKEISEAYAVLSDAEKRAQYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_HELPY (Chaperone protein dnaJ OS=Helicobacter pylori GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12
Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 3
Query:   69 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDFVQEMLSLMAEA--------RKEDKSYSMEELQTM 398
            SYY +L V  HS+ E I+++YRKLA+++HPDR         +A+ KF+ I EAY VLSDE+KR LYD     GL +        FSDF +++ S   +A        +++  S + + LQT+
Sbjct:    4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK----EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGL-NQAGASQGDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTL 120          
The following BLAST results are available for this feature:
BLAST of EY676889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
DNAJ_THEM49.450e-1356.06Chaperone protein dnaJ OS=Thermosipho melanesiensi... [more]
DNAJ_THET21.612e-1242.11Chaperone protein dnaJ OS=Thermus thermophilus (st... [more]
DNAJ_THEAB1.612e-1247.13Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNAJ_NITSB1.612e-1247.78Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNAJ_MYCGE1.612e-1253.73Chaperone protein dnaJ OS=Mycoplasma genitalium GN... [more]
DNAJ1_THET81.612e-1242.11Chaperone protein dnaJ 1 OS=Thermus thermophilus (... [more]
DNJ6B_XENLA2.105e-1251.52DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNJ6A_XENLA2.105e-1250.00DnaJ homolog subfamily B member 6-A OS=Xenopus lae... [more]
DNAJ_METMA2.105e-1257.58Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
DNAJ_HELPY2.750e-1238.52Chaperone protein dnaJ OS=Helicobacter pylori GN=d... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676889 ID=EY676889; Name=EY676889; organism=Citrus sinensis; type=EST; length=1007bp
CTTTTGATGTTTGAACCCGAACAAAATTATGAAAGATGGAGGCAGAGAGT
GAAAGGACAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATCGGTGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCATGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACAAAT
TCATAGACAATAATAAAAACGCACAATTTGGTGCTTTTCCAGGTGGCAGT
TCTATGGACCAAGTGGTTTTTGCAGAAAAAAAATCCATTTGGAATCAAAC
ATTGGAAGCAAGAATTTAAACATGAAAACCAACCAGTGAACCCCTGAATT
TTTGCTCCAATTAATTTTGGGGGGGGGAAAACACACCAATTTTTGGGGGA
AAAACGTCTTTTGCCCCCCAATGCCCCCCCTTTTCGGGGGATTTTGGGCC
TTTTTAAACCGGGGGGCTAAAACCCCTTTTGGGGCTTCCGTTTTTTTGGG
GGAGATACCTGGCGGGGGAAAAAAACCCCTTTGGGTTTGTTTTTTTTTTT
TTTCTTCCAAAACAAAAAAAAAAAAAAAAAAAAAATATCTCGGGGGGGGG
GGGGAATTTTATATTTTCTTCTTTTTTTTTTATTTTTTTTTGTGGAAAAA
AAACAAAAAAAAAAACAAAAAAGAGGGGGAGTAAAAGAAAAAAGGAGGGT
CCACTTG
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