EY676889

Overview
NameEY676889
Unique NameEY676889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1298 contig Csv1_Contig1298:68..1077. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12
Identity = 35/76 (46.05%), Postives = 54/76 (71.05%), Query Frame = 3
Query:   51 ERTVQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTP-SLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 275
            +++++  YY +LGVS  +   EI++AYRKLA+Q+HPD+  + P     +A+  F++I EAYSVLSDE+K+  YD G
Sbjct:  355 KKSLRKDYYKILGVSKEAGETEIKKAYRKLALQYHPDKNNQLPEEEKAQAEKMFKDIGEAYSVLSDEKKKRQYDMG 430          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB7_MOUSE (DnaJ homolog subfamily B member 7 OS=Mus musculus GN=Dnajb7 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  ++S E+I+RAYRK+A++WHPD   K P    +A+ KF+E+ EAY VLS+  KR +YD
Sbjct:    4 YYEVLGVQRYASPEDIKRAYRKVALKWHPD---KNPENKEEAERKFKEVAEAYEVLSNVEKRDIYD 66          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+  +S EEI+++YRKLAM++HPDR    P    KA+  F+E +EAY VLSDE+KR  YD
Sbjct:    6 YYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNP----KAEESFKEAKEAYEVLSDEQKRAAYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB3_MOUSE (DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.690e-12
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV   +S E IR+AYRKLA++WHPD   K P    +A+ +F+++ +AY VLSD RKR +YD
Sbjct:    4 YYEVLGVPRQASAEAIRKAYRKLALKWHPD---KNPEHKEEAERRFKQVAQAYEVLSDVRKREVYD 66          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB3_MACFU (DnaJ homolog subfamily B member 3 OS=Macaca fuscata fuscata GN=DNAJB3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.690e-12
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 3
Query:   69 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            +YY VLGV V    E+I++AYRKLA++WHPD   K P    +A+ +F+++ EAY VLSD +KR +YD
Sbjct:    3 NYYEVLGVQVQRFPEDIKKAYRKLALKWHPD---KNPDNKEEAERRFKQVAEAYEVLSDAKKRDVYD 66          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.690e-12
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGV  +++ EEIR+AY++L  +WHPDR    P    +A+ +F+EIQEAY VLSD +KR +YD
Sbjct:    8 YYEILGVPRNATQEEIRKAYKRLVKEWHPDR---HPENRKEAEQRFKEIQEAYEVLSDPQKRAMYD 70          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ2_THET8 (Chaperone protein dnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.690e-12
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDA------------GLYDPXXXXXXGFSDFVQEM 332
            YY++LGV  +++ EEI+RAY++LA Q+HPD   K+P    +A+ KF+EI EAY+VLSD  KR +YD             G YD        FS+F QE+
Sbjct:    7 YYAILGVPRNATQEEIKRAYKRLARQYHPD-VNKSP----EAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPPPPGGYDFSGFDVEDFSEFFQEL 100          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.000e-12
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGV   ++ EEI+RAY++L  +WHPDR    P    +A+ +F+EIQEAY VLSD +KR +YD
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDR---HPENRKEAEQRFKEIQEAYEVLSDPQKRAMYD 70          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.000e-12
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGV   ++ EEI+RAY++L  +WHPDR    P    +A+ +F+EIQEAY VLSD +KR +YD
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDR---HPENRKEAEQRFKEIQEAYEVLSDPQKRAMYD 70          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.000e-12
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGV   ++ EEI+RAY++L  +WHPDR    P    +A+ +F+EIQEAY VLSD +KR +YD
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDR---HPENRKEAEQRFKEIQEAYEVLSDPQKRAMYD 70          
The following BLAST results are available for this feature:
BLAST of EY676889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
DNJC7_DICDI3.591e-1246.05DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
DNJB7_MOUSE3.591e-1253.03DnaJ homolog subfamily B member 7 OS=Mus musculus ... [more]
DNAJ_METSS3.591e-1256.06Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNJB3_MOUSE4.690e-1253.03DnaJ homolog subfamily B member 3 OS=Mus musculus ... [more]
DNJB3_MACFU4.690e-1250.75DnaJ homolog subfamily B member 3 OS=Macaca fuscat... [more]
DNAJ_THENN4.690e-1251.52Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ2_THET84.690e-1243.43Chaperone protein dnaJ 2 OS=Thermus thermophilus (... [more]
DNAJ_THESQ8.000e-1251.52Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEP18.000e-1251.52Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]
DNAJ_THEMA8.000e-1251.52Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676889 ID=EY676889; Name=EY676889; organism=Citrus sinensis; type=EST; length=1007bp
CTTTTGATGTTTGAACCCGAACAAAATTATGAAAGATGGAGGCAGAGAGT
GAAAGGACAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATCGGTGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCATGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACAAAT
TCATAGACAATAATAAAAACGCACAATTTGGTGCTTTTCCAGGTGGCAGT
TCTATGGACCAAGTGGTTTTTGCAGAAAAAAAATCCATTTGGAATCAAAC
ATTGGAAGCAAGAATTTAAACATGAAAACCAACCAGTGAACCCCTGAATT
TTTGCTCCAATTAATTTTGGGGGGGGGAAAACACACCAATTTTTGGGGGA
AAAACGTCTTTTGCCCCCCAATGCCCCCCCTTTTCGGGGGATTTTGGGCC
TTTTTAAACCGGGGGGCTAAAACCCCTTTTGGGGCTTCCGTTTTTTTGGG
GGAGATACCTGGCGGGGGAAAAAAACCCCTTTGGGTTTGTTTTTTTTTTT
TTTCTTCCAAAACAAAAAAAAAAAAAAAAAAAAAATATCTCGGGGGGGGG
GGGGAATTTTATATTTTCTTCTTTTTTTTTTATTTTTTTTTGTGGAAAAA
AAACAAAAAAAAAAACAAAAAAGAGGGGGAGTAAAAGAAAAAAGGAGGGT
CCACTTG
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