EY676889

Overview
NameEY676889
Unique NameEY676889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_HYDTH (Chaperone protein dnaJ OS=Hydrogenobacter thermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAGLYDPXXXXXXGFSDFVQEML 335
            YY +LGVS  ++ EEI++AYR+LA ++HPD      S    A  KF+EI EAY +LSDE +R  YD  L          F +++Q+ L
Sbjct:    6 YYQILGVSKDATAEEIKKAYRRLAKEYHPD-----ISADENASEKFKEINEAYHILSDEERRKEYDRILKSGDEKSYRDFMEYIQDFL 88          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY +L +S  +S  EI+RAYRKLAM++HPDR         +A++KF+EI EAY +LSD+ KR+ YD
Sbjct:    3 QKCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDK----EAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY +L +S  +S  EI+RAYRKLAM++HPDR         +A++KF+EI EAY +LSD+ KR+ YD
Sbjct:    3 QKCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDK----EAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+ ++S E++++AYRKLAM++HPDR   +     +A+ KF+E +EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSK----EAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+ ++S E++++AYRKLAM++HPDR   +     +A+ KF+E +EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSK----EAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+ ++S E++++AYRKLAM++HPDR   +     +A+ KF+E +EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSK----EAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_AGGAC (Chaperone protein dnaJ OS=Aggregatibacter actinomycetemcomitans GN=dnaJ PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LG+S  +  +EI+RAY+KLAMQ+HPDR TK      + + KF+EIQEAY VL+D+ KR  YD
Sbjct:    6 YYELLGISRSADEKEIKRAYKKLAMQYHPDR-TKGDK---EKEEKFKEIQEAYEVLNDKEKRAAYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 3
Query:   60 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            V+  YY VLGV  ++S +EI++A+R+LA Q+HPD   K P     A+ KF+EI EAY VLSD  KR++YD
Sbjct:    3 VKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPD-VNKAPD----AEAKFKEINEAYEVLSDPEKRSMYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSCS (Chaperone protein dnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 3
Query:   60 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            V+  YY VLGV  ++S +EI++A+R+LA Q+HPD   K P     A+ KF+EI EAY VLSD  KR++YD
Sbjct:    3 VKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPD-VNKAPD----AEAKFKEINEAYEVLSDPEKRSMYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_PASMU (Chaperone protein dnaJ OS=Pasteurella multocida GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV   +  +EI+RAY+KLAM++HPDR      L    + KF+EIQEAY VLSD++KR  YD
Sbjct:    6 YYDVLGVERGADEKEIKRAYKKLAMKYHPDRTQGNKEL----EEKFKEIQEAYEVLSDKQKRANYD 67          
The following BLAST results are available for this feature:
BLAST of EY676889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
DNAJ_HYDTH3.970e-1142.05Chaperone protein dnaJ OS=Hydrogenobacter thermoph... [more]
DNAJ_FRATU3.970e-1150.72Chaperone protein dnaJ OS=Francisella tularensis G... [more]
DNAJ_FRATH3.970e-1150.72Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_BORPE3.970e-1151.52Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ_BORPA3.970e-1151.52Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR3.970e-1151.52Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNAJ_AGGAC3.970e-1154.55Chaperone protein dnaJ OS=Aggregatibacter actinomy... [more]
DNAJ_ROSS15.185e-1151.43Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_ROSCS5.185e-1151.43Chaperone protein dnaJ OS=Roseiflexus castenholzii... [more]
DNAJ_PASMU5.185e-1154.55Chaperone protein dnaJ OS=Pasteurella multocida GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676889 ID=EY676889; Name=EY676889; organism=Citrus sinensis; type=EST; length=1007bp
CTTTTGATGTTTGAACCCGAACAAAATTATGAAAGATGGAGGCAGAGAGT
GAAAGGACAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATCGGTGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCATGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACAAAT
TCATAGACAATAATAAAAACGCACAATTTGGTGCTTTTCCAGGTGGCAGT
TCTATGGACCAAGTGGTTTTTGCAGAAAAAAAATCCATTTGGAATCAAAC
ATTGGAAGCAAGAATTTAAACATGAAAACCAACCAGTGAACCCCTGAATT
TTTGCTCCAATTAATTTTGGGGGGGGGAAAACACACCAATTTTTGGGGGA
AAAACGTCTTTTGCCCCCCAATGCCCCCCCTTTTCGGGGGATTTTGGGCC
TTTTTAAACCGGGGGGCTAAAACCCCTTTTGGGGCTTCCGTTTTTTTGGG
GGAGATACCTGGCGGGGGAAAAAAACCCCTTTGGGTTTGTTTTTTTTTTT
TTTCTTCCAAAACAAAAAAAAAAAAAAAAAAAAAATATCTCGGGGGGGGG
GGGGAATTTTATATTTTCTTCTTTTTTTTTTATTTTTTTTTGTGGAAAAA
AAACAAAAAAAAAAACAAAAAAGAGGGGGAGTAAAAGAAAAAAGGAGGGT
CCACTTG
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