EY676889

Overview
NameEY676889
Unique NameEY676889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1298 contig Csv1_Contig1298:68..1077. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPA (Chaperone protein dnaJ OS=Legionella pneumophila (strain Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.845e-11
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 320
            Q  YY +L VS ++S  EI++AYR+LAM++HPDR     S    A+ KF+EIQ+AY++LSD++KR  YD    AG+         GF  F
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTS----AEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.845e-11
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDA-GLYDP 287
            YY +LGVS +++ +EI++AYRKL+ Q+HPD   K P     A  KF+EI+EAY VLSD+ KR  YD  G  DP
Sbjct:    6 YYEILGVSKNATKDEIKKAYRKLSKQYHPD-VNKAPD----AAEKFKEIKEAYEVLSDDEKRARYDRFGHADP 73          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOBW (Chaperone protein dnaJ OS=Escherichia coli (strain K12 / BW2952) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.845e-11
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   60 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            V+  YY +LGVS  +   EIR+AY++LAM++HPDR         +A+ KF+EI+EAY VL+D +KR  YD
Sbjct:    2 VKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.845e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGVS  +S +EI++AYR+LA ++HPD      S    A  KF+E+QEAY VLSDE+KR  YD
Sbjct:    6 YYEVLGVSKSASKDEIKKAYRRLAKKYHPD-----VSKEENAVEKFKEVQEAYEVLSDEQKRAQYD 66          
The following BLAST results are available for this feature:
BLAST of EY676889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
DNAJ_LEGPA8.845e-1144.44Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_GEOKA8.845e-1152.05Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_ECOBW8.845e-1148.57Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_BACCN8.845e-1154.55Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676889 ID=EY676889; Name=EY676889; organism=Citrus sinensis; type=EST; length=1007bp
CTTTTGATGTTTGAACCCGAACAAAATTATGAAAGATGGAGGCAGAGAGT
GAAAGGACAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATCGGTGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCATGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACAAAT
TCATAGACAATAATAAAAACGCACAATTTGGTGCTTTTCCAGGTGGCAGT
TCTATGGACCAAGTGGTTTTTGCAGAAAAAAAATCCATTTGGAATCAAAC
ATTGGAAGCAAGAATTTAAACATGAAAACCAACCAGTGAACCCCTGAATT
TTTGCTCCAATTAATTTTGGGGGGGGGAAAACACACCAATTTTTGGGGGA
AAAACGTCTTTTGCCCCCCAATGCCCCCCCTTTTCGGGGGATTTTGGGCC
TTTTTAAACCGGGGGGCTAAAACCCCTTTTGGGGCTTCCGTTTTTTTGGG
GGAGATACCTGGCGGGGGAAAAAAACCCCTTTGGGTTTGTTTTTTTTTTT
TTTCTTCCAAAACAAAAAAAAAAAAAAAAAAAAAATATCTCGGGGGGGGG
GGGGAATTTTATATTTTCTTCTTTTTTTTTTATTTTTTTTTGTGGAAAAA
AAACAAAAAAAAAAACAAAAAAGAGGGGGAGTAAAAGAAAAAAGGAGGGT
CCACTTG
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