EY676888

Overview
NameEY676888
Unique NameEY676888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: ALLB_ECODH (Allantoinase OS=Escherichia coli (strain K12 / DH10B) GN=allB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVT 557
            +EE+  AR+ GQ V  E      VLD       +  T AK   SPPIR   + K +   L  G +  + +DH       KA  I    K   G+ G++  M +++D  V+   +S+  + +L +T  A IF +  +KG I  G DAD +   PNSS+ +T      R   + Y GR +  ++  T
Sbjct:  249 VEEVTRARQEGQDVTCESCPHYFVLDTDQF--EEIGTLAK--CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNI---MKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKT 425          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: ALLB_ECOBW (Allantoinase OS=Escherichia coli (strain K12 / BW2952) GN=allB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVT 557
            +EE+  AR+ GQ V  E      VLD       +  T AK   SPPIR   + K +   L  G +  + +DH       KA  I    K   G+ G++  M +++D  V+   +S+  + +L +T  A IF +  +KG I  G DAD +   PNSS+ +T      R   + Y GR +  ++  T
Sbjct:  249 VEEVTRARQEGQDVTCESCPHYFVLDTDQF--EEIGTLAK--CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNI---MKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKT 425          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: ALLB_ECO81 (Allantoinase OS=Escherichia coli O81 (strain ED1a) GN=allB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVT 557
            +EE+  AR+ GQ V  E      VLD       +  T AK   SPPIR   + K +   L  G +  + +DH       KA  I    K   G+ G++  M +++D  V+   +S+  + +L +T  A IF +  +KG I  G DAD +   PNSS+ +T      R   + Y GR +  ++  T
Sbjct:  249 VEEVTRARQEGQDVTCESCPHYFVLDTDQF--EEIGTLAK--CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNI---MKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKT 425          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: ALLB_ECO45 (Allantoinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVT 557
            +EE+  AR+ GQ V  E      VLD       +  T AK   SPPIR   + K +   L  G +  + +DH       KA  I    K   G+ G++  M +++D  V+   +S+  + +L +T  A IF +  +KG I  G DAD +   PNSS+ +T      R   + Y GR +  ++  T
Sbjct:  249 VEEVTRARQEGQDVTCESCPHYFVLDTDQF--EEIGTLAK--CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNI---MKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKT 425          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: ALLB_ECO27 (Allantoinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVT 557
            +EE+  AR+ GQ V  E      VLD       +  T AK   SPPIR   + K +   L  G +  + +DH       KA  I    K   G+ G++  M +++D  V+   +S+  + +L +T  A IF +  +KG I  G DAD +   PNSS+ +T      R   + Y GR +  ++  T
Sbjct:  249 VEEVTRARQEGQDVTCESCPHYFVLDTDQF--EEIGTLAK--CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNI---MKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKT 425          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: PYRC_PELTS (Dihydroorotase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pyrC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.582e-12
Identity = 53/186 (28.49%), Postives = 86/186 (46.24%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGG 569
            I  A+  G RV  E A     L D  +   D  T     ++PP+R++G   A++  LA G + ++ TDH      +K     ++   P G+ G+E  + LVW  +V +G ++    V   +   AR+  +   KG +  G+DADI I +P+ S  +      S+     + GR +KG    T  GG
Sbjct:  241 IREAKARGVRVTAEVAPHHFTLTDEAVLGYDTSTK----VNPPLRSAGDVAAVREGLADGTIDVIATDHAPHTEEEKDV---EYDLAPFGMVGLETAVGLVWTELVAAGVLTPLQAVVKMTLNPARVLGI--PKGTLEPGADADITIIDPDLSEPVDPARFASKGRNTPFRGRLLKGLPWATIVGG 417          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: ALLB_ECO24 (Allantoinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=allB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.582e-12
Identity = 55/185 (29.73%), Postives = 87/185 (47.03%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVT 557
            +EE+  AR+ GQ V  E      VLD       +  T AK   SPPIR   + K +   L  G +  + +DH       KA  I    +   G+ G++  M +++D  V+   +S+  + +L +T  A IF +  +KG I +G DAD +   PNSS+ +T      R   + Y GR +  ++  T
Sbjct:  249 VEEVTRARQEGQDVTCESCPHYFVLDTDQF--EEIGTLAK--CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNI---MEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIALGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKT 425          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: PYRC_LACSS (Dihydroorotase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=pyrC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.985e-12
Identity = 50/186 (26.88%), Postives = 83/186 (44.62%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGG 569
            +  A+  G  +  E     L+LDD  +   D +      M+PP+R     ++L A L  G + ++ TDH    + +K+       + P G+ G E    L++  +V +G  S+   +   +T  A++FN+ P  G + VG  ADI +FN      I A    S+     + G  V G  E+T   G
Sbjct:  244 VRRAKADGVNITCEVTPHHLLLDDRSIISDDTMLK----MNPPLRTLADRQSLWAGLMDGTIDVIATDHAPHTAAEKS---QSLLQAPFGIVGSETAFSLLYTHLVVNGPFSLAQLLAKMTTVPAQVFNL-PAAGQLRVGDQADIAVFNLTQPTTIQATDFQSKGHNTPFIGETVLGGTELTLVAG 421          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: PYRC_ELUMP (Dihydroorotase OS=Elusimicrobium minutum (strain Pei191) GN=pyrC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.817e-12
Identity = 57/192 (29.69%), Postives = 89/192 (46.35%), Query Frame = 3
Query:    6 EEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC--AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGGGL 575
            E IA A+K G  V  E       L D       F    K  M+PP+R+    +AL+ AL  G +  + TDH   A +  +  F +  F     G+ G+E    L +D +V+SG I +   V L S   ++I  +  +KG +  G+DADI I + N  +  +     S    + + G+ ++G +E T  GG L
Sbjct:  240 EIIAKAKKQGVMVTAEATPHHFTLTDKAC--ESFSGNTK--MNPPLRSEADVEALKQALKDGTIDAIATDHAPHAVHEKEVEFDLAYF-----GIIGLETAFPLAYDVLVKSGLIDMAKLVGLMSLNPSKILGL--KKGTLTPGADADITIVDLNKQWVYSKEEVQSLSCNSPFIGKNLQGYIEYTFVGGEL 420          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: ALLB_ECOSE (Allantoinase OS=Escherichia coli (strain SE11) GN=allB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.021e-11
Identity = 55/185 (29.73%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVT 557
            +EE+  AR+ GQ V  E      VLD       +  T AK   SPPIR   + K +   L  G +  + +DH       KA  I    +   G+ G++  M +++D  V+   +S+  + +L +T  A IF +  +KG I  G DAD +   PNSS+ +T      R   + Y GR +  ++  T
Sbjct:  249 VEEVTRARQEGQDVTCESCPHYFVLDTDQF--EEIGTLAK--CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNI---MEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKT 425          
The following BLAST results are available for this feature:
BLAST of EY676888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ALLB_ECODH3.509e-1230.27Allantoinase OS=Escherichia coli (strain K12 / DH1... [more]
ALLB_ECOBW3.509e-1230.27Allantoinase OS=Escherichia coli (strain K12 / BW2... [more]
ALLB_ECO813.509e-1230.27Allantoinase OS=Escherichia coli O81 (strain ED1a)... [more]
ALLB_ECO453.509e-1230.27Allantoinase OS=Escherichia coli O45:K1 (strain S8... [more]
ALLB_ECO273.509e-1230.27Allantoinase OS=Escherichia coli O127:H6 (strain E... [more]
PYRC_PELTS4.582e-1228.49Dihydroorotase OS=Pelotomaculum thermopropionicum ... [more]
ALLB_ECO244.582e-1229.73Allantoinase OS=Escherichia coli O139:H28 (strain ... [more]
PYRC_LACSS5.985e-1226.88Dihydroorotase OS=Lactobacillus sakei subsp. sakei... [more]
PYRC_ELUMP7.817e-1229.69Dihydroorotase OS=Elusimicrobium minutum (strain P... [more]
ALLB_ECOSE1.021e-1129.73Allantoinase OS=Escherichia coli (strain SE11) GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-C03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676888 ID=EY676888; Name=EY676888; organism=Citrus sinensis; type=EST; length=994bp
CAATGGAAGAAATAGCTCATGCTCGAAAAGCAGGGCAGAGGGTCATTGGA
GAGCCCGCAGTTTCTGGATTAGTCCTTGATGATTCTTGGCTTTGGCATTC
AGATTTTGTCACTGCTGCAAAGTATGTCATGAGTCCCCCTATTAGAGCAT
CAGGACACAACAAGGCTCTACAAGCTGCCCTTGCAACTGGGATTTTGCAG
CTTGTAGGAACTGATCATTGTGCCTTTAATTCTACACAAAAGGCTTTTGG
TATTGATGATTTCCGGAAGATACCAAATGGTGTGAATGGTATCGAAGAGA
GGATGCATTTGGTCTGGGATACAATGGTGGAATCTGGCCAAATTTCTGTG
ACTGATTATGTCAGGTTAACTAGCACTGAATGTGCTAGAATATTCAACGT
ATATCCCAGAAAAGGAGCAATTCTTGTTGGATCTGATGCAGATATAATTA
TATTCAACCCAAATTCAAGCTTTGAAATTACTGCAAGGTCCCACCACTCT
AGAATAGATACAAATGTCTATGAAGGCAGGAAAGTAAAAGGGAAAGTTGA
AGTGACGAATGCTGGGGGCGGGTTGTTTGGGAAATGGATGACTGAAGGCC
GTTCCAGGTCCGGAAATTTCAAAAAAGGCGTCCCTTTATTATCTTTTTCT
GGGAATTGAAAAAGCCGAAGGTAATTTTTTTTTCTTCCCCCCAAGCCCCA
GGGAACGGTCTTAACCCCTCACCTAAAATTACGGGTTTTAACCTTTTTTT
TTTTTTTTTCATTTTGTGGTACAAAAATTTAAAAGGAAAAACCCGCCCCC
CATGGTCTAAAATTTTGGTGTTAGGCTTGGGAACTTTTAAAAAAAAAAAA
TTTCATCCTTGTTTTTTCCCCCCCCGGGGGAAACAAAAAAAAAAAAAAAA
CACGCGGCCCCCATCCTCATTTTTTTTAAAAAAAAAAGATATTTGACCCA
CGGGTGGTAATTAAAAAAATATTTTTTTTTTTTTTTTTTTACAA
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