EY676885

Overview
NameEY676885
Unique NameEY676885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1021
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676885 vs. ExPASy Swiss-Prot
Match: SAPKA_ORYSJ (Serine/threonine-protein kinase SAPK10 OS=Oryza sativa subsp. japonica GN=SAPK10 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.125e-12
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 3
Query:    3 LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEG 209
            L++RIFVA+P  RI+IPEI+ HPWFLKNLP + M++ + S Q  +     QS++EI+ I+ EA  P  G
Sbjct:  255 LIARIFVANPATRISIPEIRNHPWFLKNLPADLMDDSKMSSQYEEPEQPMQSMDEIMQILAEATIPAAG 323          
BLAST of EY676885 vs. ExPASy Swiss-Prot
Match: SAPK6_ORYSJ (Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 3
Query:    3 LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQS---QSIEEILGIIQEARKP 200
            LLSRIFVA+P KRITI EI+ HPWF+KNLP E  E  +    K D + ++   Q+++EI+ I+QEA+ P
Sbjct:  236 LLSRIFVANPAKRITIREIRNHPWFMKNLPRELTEAAQAKYYKKDNSARTFSDQTVDEIMKIVQEAKTP 304          
BLAST of EY676885 vs. ExPASy Swiss-Prot
Match: SRK2G_ARATH (Serine/threonine-protein kinase SRK2G OS=Arabidopsis thaliana GN=SRK2G PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.734e-12
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3
Query:    3 LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKP 200
            LLSRIFV +  KRIT+ EI+ HPW+LKNLP E +E  + +  K D +   QS+E+I+ I+ EAR P
Sbjct:  236 LLSRIFVTNSAKRITLKEIKNHPWYLKNLPKELLESAQAAYYKRDTSFSLQSVEDIMKIVGEARNP 301          
BLAST of EY676885 vs. ExPASy Swiss-Prot
Match: SAPK8_ORYSJ (Serine/threonine-protein kinase SAPK8 OS=Oryza sativa subsp. japonica GN=SAPK8 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.055e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:    3 LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKP 200
            L+SRIFV DP  RITIPEI+ H WFLKNLP + M++D  S Q  + +   Q++++I+ I+ EA  P
Sbjct:  265 LISRIFVGDPSLRITIPEIRSHGWFLKNLPADLMDDDSMSSQYEEPDQPMQTMDQIMQILTEATIP 330          
BLAST of EY676885 vs. ExPASy Swiss-Prot
Match: SRK2I_ARATH (Serine/threonine-protein kinase SRK2I OS=Arabidopsis thaliana GN=SRK2I PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 3
Query:    3 LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKP 200
            L+SRIFVADP  RI+IPEI+ H WFLKNLP + M E     Q  +     QS++ I+ II EA  P
Sbjct:  254 LISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIISEATIP 319          
BLAST of EY676885 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3
Query:    3 LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGS-MQKGDENDQSQSIEEILGIIQEARKP 200
            LLSRIFV +  KRITI +I+KHPWFLKNLP E  E  + +  +K +     QS+EEI+ I++EA+ P
Sbjct:  236 LLSRIFVTNSNKRITIGDIKKHPWFLKNLPRELTEIAQAAYFRKENPTFSLQSVEEIMKIVEEAKTP 302          
The following BLAST results are available for this feature:
BLAST of EY676885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
SAPKA_ORYSJ2.125e-1249.28Serine/threonine-protein kinase SAPK10 OS=Oryza sa... [more]
SAPK6_ORYSJ3.625e-1252.17Serine/threonine-protein kinase SAPK6 OS=Oryza sat... [more]
SRK2G_ARATH4.734e-1251.52Serine/threonine-protein kinase SRK2G OS=Arabidops... [more]
SAPK8_ORYSJ1.055e-1150.00Serine/threonine-protein kinase SAPK8 OS=Oryza sat... [more]
SRK2I_ARATH5.234e-1151.52Serine/threonine-protein kinase SRK2I OS=Arabidops... [more]
SRK2B_ARATH8.929e-1152.24Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-B11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676885 ID=EY676885; Name=EY676885; organism=Citrus sinensis; type=EST; length=1021bp
ATCTCTTATCTCGGATTTTTGTGGCCGACCCCGAAAAGAGAATAACCATA
CCAGAAATTCAAAAGCACCCATGGTTCTTAAAGAATTTGCCAATAGAATT
CATGGAAGAAGATGAAGGGAGCATGCAAAAAGGTGATGAAAATGACCAAT
CTCAGAGTATTGAAGAAATATTAGGCATCATTCAGGAGGCACGAAAACCA
GGGGAGGGTCCCAAATTTGGTGGGCAATGCTTAATAGGAGGAAGTATGGA
TCTCGATGATTTGGATACAGATGCAGATACAGATGATATTGAGACAAGCG
GCGATTTTGTCTGTGCATTATGAGATTTGAGTGCCAACTTCAAAATCATT
TCATCTTGCCAATTGCTTGCCTACCTCAAATTTCTGGATAAGGTGGCTGT
CTCCTCATGTCCTTGGGAATCAAATGATTTGGTGTTTAGAATTTTATGGG
TGATGGTGATTTTCTATCTGTTTTTATTTTTCTGAATGGGTAAACAGGGG
AAACCTTCCTCCTTCTAAAGAATTGCTTCATTTGTATATTTAAGTTCATA
ATTTTTGTAATAGGTAAAAACTTTTAAATTGTCCCATAGTTAAATTTAAG
GGGAAGGTTGGAAAAATTTTAAAAAAAAAAAAATTTGGGCCCCCCCTTTT
TTACCCCAAAAAAAAAAAATAAATAATAAAAAAAAAAAAAAAAAATAAAG
GGGGGGGGCACCCCTATAAAAAAATCAAAACTTTAAATAAACCTTTGGAT
GAGCAAATTATTATCCCTTTTTTTAAATAGTTGTAACCCCAAAATTTTAT
ATTTCTACGGGGCCCGCCTTTTTTTCATAACACATGCGGAGAAGCGGGGA
GAAAAACCCCTAGGTGGGGTTGTACACCAACAAAATATAAGCACGCCTTG
TGTTGAGGACCCCGTACTCCCCCCCCCCTTTTTTTTTCCCCGCAGGGTGG
GGGGGGAGAAAAGAGAAAACGATGAAAAAAGAAGAGAAGCCTGCCCCGCT
CGCTGCGCCTATAGAACGCCA
back to top