EY676881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: SSN8_ASHGO (RNA polymerase II holoenzyme cyclin-like subunit OS=Ashbya gossypii GN=SSN8 PE=3 SV=2) HSP 1 Score: 51.9878 bits (123), Expect = 1.039e-14 Identity = 25/80 (31.25%), Postives = 44/80 (55.00%), Query Frame = 2 Query: 398 ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMT------PLSWEILNDT*KMDLILGHPPHLMALACIYIGRC 619 + E E ++E L Y++V +PYR++ Q N+ SW ++ND+ D+ L +PPH++A+AC++I C Sbjct: 159 VTEFEFYLIEELQSYMIVHYPYRAMEQIAAALRRPPYNLVLSPDDLQNSWSLINDSYITDVHLLYPPHVIAMACLFITVC 238 HSP 2 Score: 49.6766 bits (117), Expect = 1.039e-14 Identity = 32/100 (32.00%), Postives = 50/100 (50.00%), Query Frame = 1 Query: 85 AQPLDREKGITVEDYKL-----IKMQMSNYISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSE 369 AQP+ + IT D +++ I KL + + VRQ +ATA Y+ R + S+ E + +L+ TC+YLA K EE R LV + ++ E Sbjct: 51 AQPVTKNIPITHRDLHYDRDYNLRIYCYFLIMKLGRRLNVRQYALATAHVYLARFCLKASIREVNLYLLVTTCIYLACKVEECPQHIRTLVNEARSLWPE 150
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: SSN8_CANGA (RNA polymerase II holoenzyme cyclin-like subunit OS=Candida glabrata GN=SSN8 PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 1.349e-14 Identity = 25/77 (32.47%), Postives = 44/77 (57.14%), Query Frame = 2 Query: 398 ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMTPLS------WEILNDT*KMDLILGHPPHLMALACIYI 610 + E E ++E L YL+V HPY+S+ Q ++ +T S W ++ND+ D+ L + PH++A+AC++I Sbjct: 178 VTEFEFYLIEELQCYLIVHHPYKSMEQIVEALKEEPFKLTFTSDELQNCWSLINDSFINDVHLTYAPHIIAMACLFI 254 HSP 2 Score: 48.1358 bits (113), Expect = 1.349e-14 Identity = 28/83 (33.73%), Postives = 45/83 (54.22%), Query Frame = 1 Query: 121 EDYKLIKMQMSNYISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSE 369 +DY L ++ I KL + + +RQ +ATA Y+ R + S+ E + +L+ TC+YLA K EE R LV + ++ E Sbjct: 88 KDYNL-RIYCYFLIMKLGRRLNIRQYALATAHIYLSRFLLKASVREVNLYLLVTTCVYLACKVEECPQYIRTLVSEARSLWPE 169
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: CCNC_CAEBR (Cyclin-C OS=Caenorhabditis briggsae GN=cic-1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 2.286e-14 Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 19 MAANFWTSSHYKQLLDQEDVDVAQPLDREKGITVEDYKLIKMQMSNYISKLAQHV---------KVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEEST 321 MA +FW SSH +Q + + Q + K + E+Y + + +N+I+ +A K+RQ+V+ATA+ Y +R Y R+S + P LVA T L+LA K EE T Sbjct: 1 MALDFWKSSHAQQWIFDKTEIWKQRAEDMKTYSEEEYSRLNIFWANFITAVATECAHSQANVGCKLRQQVIATAIVYFKRFYLRQSFRDMCPFLVASTALFLACKVEEHT 110 HSP 2 Score: 33.4982 bits (75), Expect = 2.286e-14 Identity = 23/83 (27.71%), Postives = 41/83 (49.40%), Query Frame = 2 Query: 398 ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMT--PLS---------WEILNDT*KMDLILGHPPHLMALACIYIG 613 + + E ++E L+ LVV H R + + L+D + + T P+ +++NDT + D+ L PH + LA I +G Sbjct: 143 LYDSEFILVEILDCCLVVHHATRPMFELLEDWKQHTLTSTNTPVKDFDQIEIQCQKVVNDTLRCDVGLMFAPHCIGLASISVG 225
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: SSN8_GIBMO (RNA polymerase II holoenzyme cyclin-like subunit OS=Gibberella moniliformis GN=SSN8 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.851e-14 Identity = 35/124 (28.23%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 19 MAANFW--TSSHYKQLLDQEDVDVAQPLDREKGITVEDYKL-----IKMQMSNYISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSE 369 M+AN+W T + ++ V + Q L+ + V + L + + + + +LA+ + +RQ+ +ATA YM+R Y++ + +P+LV T +YLA K EES RL+V ++++ + Sbjct: 1 MSANYWHSTQCRFWSFTKEQLVTMRQKLEEDNAELVRMFPLPQQRRLYIYFNQQLIRLAKRLTIRQQSMATAQVYMKRFYSKVEIRRTNPYLVIATAIYLACKIEESPQHIRLIVTEARQMWGD 124 HSP 2 Score: 38.1206 bits (87), Expect = 3.851e-14 Identity = 19/69 (27.54%), Postives = 37/69 (53.62%), Query Frame = 2 Query: 404 EMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMTPLSWEILNDT*KMDLILGHPPHLMALACIYI 610 E E ++ + L+VF PYR++ + + + + L+ ++ND DL L +PPH++A+ I + Sbjct: 135 ECEFFMISEMRSQLIVFQPYRTITALRNELSLVD-DEVQLARSVINDHFMTDLPLLYPPHIIAMVAILL 202
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: SSN8_KLULA (RNA polymerase II holoenzyme cyclin-like subunit OS=Kluyveromyces lactis GN=SSN8 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 3.857e-14 Identity = 26/84 (30.95%), Postives = 44/84 (52.38%), Query Frame = 2 Query: 386 EVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINM------TPLSWEILNDT*KMDLILGHPPHLMALACIYIGRC 619 +V + E E ++E L YL+V HPYRSL Q + + N W ++ND+ D+ L + PH++A++C++ C Sbjct: 154 DVTKVTEFEFYLIEELQSYLIVHHPYRSLEQIEKALSSEKYNYKLSDDELQKIWSLINDSYTTDVHLLYSPHVIAISCLFAVSC 237 HSP 2 Score: 47.3654 bits (111), Expect = 3.857e-14 Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 1 Query: 160 ISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSE 369 I KL + + +RQ + TA Y+ R R S+ E + +L+ TC+YLA K EE R LV + ++ E Sbjct: 80 IMKLGRRLNIRQCALVTAHVYLSRFLLRASVREVNLYLLITTCIYLACKVEECPQHIRTLVNEARSLWPE 149
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: CCNC_CAEEL (Cyclin-C OS=Caenorhabditis elegans GN=cic-1 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 1.099e-13 Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 1 Query: 19 MAANFWTSSHYKQLLDQEDVDVAQPLDREKGITVEDYKLIKMQMSNYISKLAQH---------VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEEST 321 MA NFW SSH +Q + + Q + K E+Y + + +N+I+ +A K+RQ+V+ATA+ Y +R Y R+S + P LVA T L+LA K EE T Sbjct: 1 MALNFWKSSHCQQWIFDKTEIWKQRAEDMKIYNEEEYNRLNIFWANFITAVATEGAHSQANVGCKLRQQVIATAIIYFKRFYLRQSFRDMCPFLVASTALFLACKVEEHT 110 HSP 2 Score: 30.8018 bits (68), Expect = 1.099e-13 Identity = 21/84 (25.00%), Postives = 40/84 (47.62%), Query Frame = 2 Query: 398 ILEMEMKILEALNYYLVVFHPYRSLVQFLQD----AGMNEINMTPLS---------WEILNDT*KMDLILGHPPHLMALACIYI 610 + + E ++E L+ LVV H R + + L+D + I P+ ++ ND+ + D+ L PPH++ L+ I + Sbjct: 143 VYDSEFILVEILDCCLVVHHASRPMFELLEDLKQFTQQSTIANQPIKDLEAIEAQCQKVANDSLRCDVSLIFPPHVIGLSSIMV 226
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 46.9802 bits (110), Expect = 2.484e-12 Identity = 29/127 (22.83%), Postives = 61/127 (48.03%), Query Frame = 1 Query: 7 WGEKMAANFWTSSHYKQ------LLDQEDVDVAQPLDREKGITVEDYKLIKMQMSNYISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSE 369 + E ++ +SH KQ +++++ P R GI ++ ++ ++ L +KV Q +ATA+ + R + R+S + D +A C++LA K EE+ + ++F +I ++ Sbjct: 11 YSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSP-SRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINK 136 HSP 2 Score: 46.595 bits (109), Expect = 2.484e-12 Identity = 29/103 (28.16%), Postives = 50/103 (48.54%), Query Frame = 2 Query: 371 EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMTPLSWEILNDT*KMDLILGHPPHLMALACIYIGRCN*RKK*PPLG----WKTFGV 667 E Y + + IL E +L L + L V+HPY+ LV+ ++ + + + ++W +ND + L L PH +A I++ + K P G W+ F V Sbjct: 149 EVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDV 251
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 5.446e-12 Identity = 22/73 (30.14%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 100 REKGITVEDYKLIKMQMSNYISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEES 318 R GI ++ ++ ++ L +KV Q +ATA+ + R Y R+S + D +A C++LA K EE+ Sbjct: 50 RRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVEET 122 HSP 2 Score: 43.8986 bits (102), Expect = 5.446e-12 Identity = 29/103 (28.16%), Postives = 49/103 (47.57%), Query Frame = 2 Query: 371 EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMTPLSWEILNDT*KMDLILGHPPHLMALACIYIGRCN*RKK*PPLG----WKTFGV 667 E Y + + IL E +L L + L V HPY+ LV+ ++ + + + ++W +ND + L L PH +A I++ + K P G W+ F V Sbjct: 152 EVYDQQKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDV 254
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 48.521 bits (114), Expect = 5.461e-12 Identity = 22/75 (29.33%), Postives = 39/75 (52.00%), Query Frame = 1 Query: 94 LDREKGITVEDYKLIKMQMSNYISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEES 318 L R GI ++ ++ ++ L +KV Q +ATA+ + R + R+S + D +A C++LA K EE+ Sbjct: 49 LSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEET 123 HSP 2 Score: 43.8986 bits (102), Expect = 5.461e-12 Identity = 36/141 (25.53%), Postives = 64/141 (45.39%), Query Frame = 2 Query: 371 EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMTPLSWEILNDT*KMDLILGHPPHLMALACIYIGRCN*RKK*PPLG----WKTFGVDLKGGEKHSQGEKFKIFLENPKTGLRGGKKKNPPLSGN 781 E Y + + IL E +L L + L V HPY+ LV+ ++ + + + ++W +ND + L L PH +A I++ + K P G W+ F V + E+ S + +++ +N + PP GN Sbjct: 153 EVYEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVS-NQMLELYEQN--------RVAPPPSQGN 284
BLAST of EY676881 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 1.547e-11 Identity = 30/111 (27.03%), Postives = 52/111 (46.85%), Query Frame = 2 Query: 347 TLKKYILNEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNEINMTPLSWEILNDT*KMDLILGHPPHLMALACIYIGRCN*RKK*PPLG----WKTFGV 667 T +K E Y + + IL E +L L + V+HPY+ LV+ ++ + + + ++W +ND + L L PH +A I++ + K P G W+ F V Sbjct: 141 TAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDV 251 HSP 2 Score: 44.2838 bits (103), Expect = 1.547e-11 Identity = 26/110 (23.64%), Postives = 53/110 (48.18%), Query Frame = 1 Query: 7 WGEKMAANFWTSSHYKQ------LLDQEDVDVAQPLDREKGITVEDYKLIKMQMSNYISKLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEES 318 +GE +++ +S+ KQ +++++ P R I ++ ++ ++ L +KV Q +ATA+ + R + R+S D +A C++LA K EE+ Sbjct: 11 FGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSP-SRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEET 119 The following BLAST results are available for this feature:
BLAST of EY676881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676881 ID=EY676881; Name=EY676881; organism=Citrus sinensis; type=EST; length=1000bpback to top |