EY680426

Overview
NameEY680426
Unique NameEY680426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_XENTR (V-type proton ATPase subunit C 1 OS=Xenopus tropicalis GN=atp6v1c1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.849e-26
Identity = 72/222 (32.43%), Postives = 119/222 (53.60%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W +L    +K++  +   +FNIP+L+VGT            K ++FVE    K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++L+TLL  +  +      W+     LA M  P S  +L ED +
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGTVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYN--DWVKQYETLAEMVVPRSSNVLSEDQD 221          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_XENLA (V-type proton ATPase subunit C 1 OS=Xenopus laevis GN=atp6v1c1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.379e-26
Identity = 71/222 (31.98%), Postives = 119/222 (53.60%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W +L    +K++  +   +FNIP+L+VGT            K ++FVE    K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++L+TLL  +  +      W+     L+ M  P S  +L ED +
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGAVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKN--NYTDWMKEYETLSEMVVPRSSNVLSEDQD 221          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_MANSE (V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.175e-26
Identity = 78/246 (31.71%), Postives = 121/246 (49.19%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTEDIITSKHLVTLLCCLSPSTPRRIGWLPMRS*LAMWSPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGF 774
            S YW++S P   +    W  L +    ++     Y+F IP+L+VGT            K ++FVE V+ K+ + + E LE        +L+ +   +  YLTRF WD AKYP    LR I D I   V +I+ DLKV+ + YN ++  L  + +KQ+GSL  R+L++LVK E  I     +T L  + P +              M  P S +L+++D +Y  L   T  + + +  K  ARE+ F
Sbjct:    2 SEYWLISAPGDKTCQQTWEALNQATKANNLSLN-YKFPIPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLTANNDDLPHYLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLQNLEKKQTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKSMFNDWNANYEKITDMIVPRSTQLIHQDGDYG-LFTVTLFKKVVDEFKLHARERKF 245          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_DICDI (V-type proton ATPase subunit C OS=Dictyostelium discoideum GN=vatC PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.730e-24
Identity = 60/179 (33.52%), Postives = 106/179 (59.22%), Query Frame = 1
Query:   46 YWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTEDIITSKHLVT 582
            +W++S P     A +++++ ++ +K +  +   +FN P LRVGT            K ++ VES + KI RQ+ +L      +  SLS++G  +  YL +F WD+AKY     L+EIV+ I + V+KI+DDLK++ +EY+ + S + +  RK SG+L VR L++L+  ++I+ + +  T
Sbjct:    7 FWLISAP-NLPGADIFDQVNQKTAKENSLSENKKFNTPALRVGTLNSLITLNDELQKIDTIVESTTKKIARQLVDLVGTKPGKDKSLSINGHTIPQYLQQFAWDDAKYNLKLSLQEIVEKISSAVSKIDDDLKIKSSEYSTLSSSVASEERKASGNLQVRTLNDLITADNIVQTDYFTT 184          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC2_RAT (V-type proton ATPase subunit C 2 OS=Rattus norvegicus GN=Atp6v1c2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.465e-23
Identity = 71/222 (31.98%), Postives = 117/222 (52.70%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            S +W++S P          R+    SK +      +F IP+ +VGT            K ++F ES+  ++ + + E +E   G    +L  +GV + +++T F WD AKYP   PL  +VD +   +A+IE DLK R A Y+ +++ L  + +K +G+L  R LS++V  ED ++ S++L+TLL  +  S+   + W      L+ M  P S KL+ EDNE
Sbjct:    2 SEFWLISAPGDKENLQALERMNSVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKVHENLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKKSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSS--YVQWQKTYESLSDMVVPRSTKLIAEDNE 220          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC2_HUMAN (V-type proton ATPase subunit C 2 OS=Homo sapiens GN=ATP6V1C2 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.913e-23
Identity = 75/224 (33.48%), Postives = 115/224 (51.34%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKH--SFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            S +W++S P          R+    SK   S++T   +F IP+ +VGT            K ++F ES+  ++ + + E +E   G     L  +GV + +++T F WD AKYP   PL  +VD I   +A+IE DLK R A YN +++ L  + +K  G+L  R LS++V  ED ++ S++LVTLL  +    P    W      L+ M  P S KL+ ED E
Sbjct:    2 SEFWLISAPGDKENLQALERMNTVTSKSNLSYNT---KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIV--PKPNYSQWQKTYESLSDMVVPRSTKLITEDKE 220          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_CAEEL (V-type proton ATPase subunit C OS=Caenorhabditis elegans GN=vha-11 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.263e-23
Identity = 74/249 (29.72%), Postives = 134/249 (53.82%), Query Frame = 1
Query:   37 ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*L-AMWSPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGF 774
            +  YW++S+P +  A   W++L       S ++   ++ IP+L+VGT            K ++  E+V  K+ +   E LE      + +L +    + TY+T+F W+ AKYP    L+ + + I   +++I++DLKV+   YNN+++ L +++RK  GSL  +DL++LVK +D ++ S++L T++  +   + +   W    + L +M  P S KLL E+ E+A L   T  + + +  K  ARE  F
Sbjct:    6 SGEYWLISVPGEKGANDAWDKLNRSTGNTSTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQTVIVVVPKISVKE--WEQKYATLSSMVVPGSSKLLTEEGEHA-LYTVTLFKKVIDEFKNTARENKF 248          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC2_MOUSE (V-type proton ATPase subunit C 2 OS=Mus musculus GN=Atp6v1c2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.566e-23
Identity = 70/222 (31.53%), Postives = 117/222 (52.70%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            S +W++S P          R+    SK +      +F IP+ +VGT            K ++F ES+  ++ + + E +E   G    +L  +GV + +++T F WD AKYP   PL  +VD +   +A+IE DLK R A Y+ +++ L  + ++ +G+L  R LS++V  ED ++ S++L+TLL  +  S+  +  W      L+ M  P S KL+ EDNE
Sbjct:    2 SEFWLISAPGDKENLQALERMNNVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKAHETLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKRSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSSFAQ--WQKTYESLSDMVVPRSTKLIAEDNE 220          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_CAEBR (V-type proton ATPase subunit C OS=Caenorhabditis briggsae GN=vha-11 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.270e-23
Identity = 71/252 (28.17%), Postives = 127/252 (50.40%), Query Frame = 1
Query:   22 SDREMASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTEDIITSKHLVTLLCCLSPSTPRRIGWLPMRS*LAMWSPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGF 774
            S    +  YW++S+P +  A   W++L       S ++   ++ IP+L+VGT            K ++  E V  K+ +   E LE      + +L +    + TY+T+F W+ AKYP    L+ + + I   + +I++DLK++   YNN+++ L +++RK +GSL  +DL++LVK ED + +   +  +  + P    +       +  +M  P S KLL E+ E+A L   T  + + +  K  ARE  F
Sbjct:    2 SSAATSGEYWLISVPGEKGANDAWDKLNRATGNISTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEGVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQITQIDNDLKMKSLAYNNLKNALASMDRKTTGSLLTKDLADLVKAEDFVLNSEYLQTIIVVVPKILVKEWETKYATLSSMVVPGSSKLLTEEGEHA-LYTVTLFKKVIDEFKNIARENKF 249          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_ASCSS (V-type proton ATPase subunit C 2 OS=Ascidia sydneiensis samea GN=VATC PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.608e-22
Identity = 70/224 (31.25%), Postives = 118/224 (52.68%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFD-TPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTEDIIT-SKHLVTLLCCLSPSTPRRIGWLPMRS*LAMW-SPSSPKLLYEDNEY 699
            S +WV+S P   +    + RLQ+       + +  Y+F+IP L+VGT            K ++F E V  K+   + E LE      SS+LS     +  ++ RF W+ AKYPT  P++ + + +  +V +++ DL+ +   YNN++S L  + RK +GSL +R+LS +VK +D I  S++L T++  +  +      W      LA + +P S +LL +D EY
Sbjct:    2 SEFWVISAPGDKTPQQTYERLQKATMGSGQNLSNCYKFSIPELKVGTLDSLIGLTDDLGKLDTFCEGVCRKVASYMGEVLEDQKDKLSSNLSAGEGTLVNFMHRFQWNMAKYPTKQPIKSLTEILSKVVTQVDTDLRSKSQAYNNLKSSLQNMERKATGSLLLRNLSQIVKKDDFIDGSEYLRTVIVAVPVALFGE--WEKNYESLADYVAPKSSRLLTQDEEY 223          
The following BLAST results are available for this feature:
BLAST of EY680426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
VATC1_XENTR1.849e-2632.43V-type proton ATPase subunit C 1 OS=Xenopus tropic... [more]
VATC1_XENLA5.379e-2631.98V-type proton ATPase subunit C 1 OS=Xenopus laevis... [more]
VATC_MANSE9.175e-2631.71V-type proton ATPase subunit C OS=Manduca sexta PE... [more]
VATC_DICDI1.730e-2433.52V-type proton ATPase subunit C OS=Dictyostelium di... [more]
VATC2_RAT1.465e-2331.98V-type proton ATPase subunit C 2 OS=Rattus norvegi... [more]
VATC2_HUMAN1.913e-2333.48V-type proton ATPase subunit C 2 OS=Homo sapiens G... [more]
VATC_CAEEL3.263e-2329.72V-type proton ATPase subunit C OS=Caenorhabditis e... [more]
VATC2_MOUSE5.566e-2331.53V-type proton ATPase subunit C 2 OS=Mus musculus G... [more]
VATC_CAEBR7.270e-2328.17V-type proton ATPase subunit C OS=Caenorhabditis b... [more]
VATC_ASCSS3.608e-2231.25V-type proton ATPase subunit C 2 OS=Ascidia sydnei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680426 ID=EY680426; Name=EY680426; organism=Citrus sinensis; type=EST; length=814bp
CAGAGCGAAAGTGAGAGTGAAAGTGATCGTGAAATGGCATCAAGGTACTG
GGTGGTGTCTCTTCCAGTACAAAATTCAGCCGCTTCTGTTTGGAATCGAT
TACAGGAACAAATCTCTAAACATTCATTTGACACTCCTCTTTACAGGTTT
AATATCCCCAACCTCCGTGTTGGAACCCTAGATTCACTCCTTGCACTTAG
CGATGATCTCGTGAAGTCAAATAGCTTTGTTGAATCAGTATCTCACAAGA
TCAGGCGACAGATTGAGGAACTGGAGAGGGTATCAGGCATAGAGAGTAGT
TCTTTGAGTGTTGATGGAGTACCAGTTGATACTTATCTCACTAGGTTTGT
TTGGGATGAAGCAAAGTACCCAACTATGTCACCTTTAAGGGAAATTGTGG
ATGGCATTCATACTCTTGTGGCAAAGATTGAAGACGATCTTAAGGTTCGT
GTTGCTGAGTATAATAATGTCCGCAGTCAGCTGAATGCTATTAATCGAAA
GCAAAGTGGAAGCTTAGCTGTTCGTGATCTTTCCAATCTGGTAAAAACAG
AGGATATCATTACCTCAAAACATCTTGTAACCCTTCTTTGCTGTTTGTCC
CCAAGTACTCCCAGAAGGATTGGTTGGCTACCTATGAGAAGTTGACTAGC
TATGTGGTCCCCAAGTTCTCCAAAGCTATTGTATGAAGATAATGAATATG
CCCCTTTACCCGGTCCAACTAATTTGGAGGTGTTGCAAAACAATTCAAAA
AAACCTGCCCGTGAAAAAGGGTTCCAAAATTCGTGAATTTGAAAAAAAAT
TCTGAAACCAAAAA
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