EY680426

Overview
NameEY680426
Unique NameEY680426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_DROME (V-type proton ATPase subunit C OS=Drosophila melanogaster GN=Vha44 PE=1 SV=5)

HSP 1 Score: 84.7297 bits (208), Expect = 6.590e-16
Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 1
Query:  334 YLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTEDIITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGF 774
            YLTRF WD AKYP    LR I D I   + +I+ DLK +   YNN++  L  + +K++GSL  R+L++LVK E  I     +T L  + P       WL     +  M  P S +L+ ED +Y  L   T  + +    K  ARE+ F
Sbjct:  550 YLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGNLQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMAN-DWLTNYEKITDMIVPRSSQLIQEDADYC-LFNVTLFKKVAEEFKLHARERKF 695          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_YEAST (V-type proton ATPase subunit C OS=Saccharomyces cerevisiae GN=VMA5 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 54/213 (25.35%), Postives = 103/213 (48.36%), Query Frame = 1
Query:  148 FNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LAMWSPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKK---PAREKGF 774
            F IP  ++G+            K ++ + +   KI   ++ L   S     +L ++ +PV  YL  F W   K+     +++++  I    ++++ D++   A YN+ ++ L A  RK++G L+VR L ++VK ED ++ S+HL T+L  + P + +        +      P+S  ++ ED EY       N+ + + N ++    AREK F
Sbjct:   48 FKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAV-PKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLF----NVHLFKKNVQEFTTAAREKKF 255          
The following BLAST results are available for this feature:
BLAST of EY680426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
VATC_DROME6.590e-1636.49V-type proton ATPase subunit C OS=Drosophila melan... [more]
VATC_YEAST3.061e-1325.35V-type proton ATPase subunit C OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680426 ID=EY680426; Name=EY680426; organism=Citrus sinensis; type=EST; length=814bp
CAGAGCGAAAGTGAGAGTGAAAGTGATCGTGAAATGGCATCAAGGTACTG
GGTGGTGTCTCTTCCAGTACAAAATTCAGCCGCTTCTGTTTGGAATCGAT
TACAGGAACAAATCTCTAAACATTCATTTGACACTCCTCTTTACAGGTTT
AATATCCCCAACCTCCGTGTTGGAACCCTAGATTCACTCCTTGCACTTAG
CGATGATCTCGTGAAGTCAAATAGCTTTGTTGAATCAGTATCTCACAAGA
TCAGGCGACAGATTGAGGAACTGGAGAGGGTATCAGGCATAGAGAGTAGT
TCTTTGAGTGTTGATGGAGTACCAGTTGATACTTATCTCACTAGGTTTGT
TTGGGATGAAGCAAAGTACCCAACTATGTCACCTTTAAGGGAAATTGTGG
ATGGCATTCATACTCTTGTGGCAAAGATTGAAGACGATCTTAAGGTTCGT
GTTGCTGAGTATAATAATGTCCGCAGTCAGCTGAATGCTATTAATCGAAA
GCAAAGTGGAAGCTTAGCTGTTCGTGATCTTTCCAATCTGGTAAAAACAG
AGGATATCATTACCTCAAAACATCTTGTAACCCTTCTTTGCTGTTTGTCC
CCAAGTACTCCCAGAAGGATTGGTTGGCTACCTATGAGAAGTTGACTAGC
TATGTGGTCCCCAAGTTCTCCAAAGCTATTGTATGAAGATAATGAATATG
CCCCTTTACCCGGTCCAACTAATTTGGAGGTGTTGCAAAACAATTCAAAA
AAACCTGCCCGTGAAAAAGGGTTCCAAAATTCGTGAATTTGAAAAAAAAT
TCTGAAACCAAAAA
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