EY758164

Overview
NameEY758164
Unique NameEY758164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY758164 vs. ExPASy Swiss-Prot
Match: PECI_MOUSE (Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Mus musculus GN=Peci PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.045e-15
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  197 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAA 436
            N+V+L+LYALYK ATEGPC+ P+P  L    +AKW AW  LG++P E A Q Y+D+V+ L  +  A S  + KRG ++ A
Sbjct:   57 NEVKLRLYALYKQATEGPCNMPKPGMLDFVNKAKWDAWNALGSLPKETARQNYVDLVSSLSSSSEAPS--QGKRGADEKA 134          
BLAST of EY758164 vs. ExPASy Swiss-Prot
Match: PECI_HUMAN (Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Homo sapiens GN=PECI PE=1 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 2
Query:  197 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLK 409
            N+V+L+LYALYK ATEGPC+ P+P    +  +AKW AW  LG++P E A Q Y+D+V+ L P+  + S ++
Sbjct:   59 NEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVE 129          
BLAST of EY758164 vs. ExPASy Swiss-Prot
Match: PECI_RAT (Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Rattus norvegicus GN=Peci PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 2
Query:  197 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSK 451
            N+V+L+LYALYK ATEGPC+ P+P       +AKW AW  LG++P E A Q Y+D+V+ L  +  A S  K   G  D  + +SK
Sbjct:   57 NEVKLRLYALYKQATEGPCTMPKPGVFDFVNKAKWDAWNALGSLPKETARQNYVDLVSSLSSSSEASSQGK---GGADGKAQESK 138          
BLAST of EY758164 vs. ExPASy Swiss-Prot
Match: ACBP3_ARATH (Acyl-CoA-binding domain-containing protein 3 OS=Arabidopsis thaliana GN=ACBP3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 2
Query:  200 DVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYP 382
            + +++L+ L+KIATEG C   QP A+ ++ARAKW AWQKLG M  EEAM++Y+ +V++  P
Sbjct:  254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLALVSKEIP 314          
BLAST of EY758164 vs. ExPASy Swiss-Prot
Match: ACBP4_ARATH (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 2
Query:  197 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSS 403
            +D  L LYALY+ AT GPC+ P+PSA +   ++KW++WQ LG MP  EAM+ ++ I+ E  P W + +S
Sbjct:   41 DDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRLFVKILEEDDPGWYSRAS 109          
BLAST of EY758164 vs. ExPASy Swiss-Prot
Match: ACBP5_ARATH (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=ACBP5 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.591e-11
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 2
Query:  197 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTW 388
            ND  L LY L++ AT GPCS P+PSA     ++KW++WQ LG MP  EAM+ ++ I+ E  P W
Sbjct:   42 NDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQGLGTMPSIEAMRLFVKILEEADPGW 105          
The following BLAST results are available for this feature:
BLAST of EY758164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PECI_MOUSE5.045e-1548.75Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Mus m... [more]
PECI_HUMAN8.605e-1547.89Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Homo ... [more]
PECI_RAT1.917e-1445.88Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Rattu... [more]
ACBP3_ARATH3.997e-1250.82Acyl-CoA-binding domain-containing protein 3 OS=Ar... [more]
ACBP4_ARATH1.163e-1146.38Acyl-CoA-binding domain-containing protein 4 OS=Ar... [more]
ACBP5_ARATH2.591e-1148.44Acyl-CoA-binding domain-containing protein 5 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-H07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758164 ID=EY758164; Name=EY758164; organism=Citrus sinensis; type=EST; length=906bp
CGGCTCTCACGATACGGAGTCGATGATCGCGGCACAAGGAAGCGTGAGGA
ACGAAGAGAGCTTGCCTTGCAGTGATGTTGACAGCGATGGTGACGATGAT
TGGGAGGGTGTCGAGTCTACGGAACTGGATGAGATGTTCAGTGCGGCCAC
GGCATTTGTGGCGGCCAGTGCTGCTGCCTCGTCGAAGAAGGTGTCCAATG
ATGTGCAGTTGCAGCTCTATGCGTTGTACAAGATTGCCACTGAAGGTCCC
TGTAGTGCTCCCCAGCCTTCTGCGTTGAAAATGACCGCTCGGGCCAAGTG
GCAAGCATGGCAGAAATTGGGTGCCATGCCTCCAGAAGAAGCAATGCAGA
AATACATTGATATTGTTACAGAGCTGTATCCTACTTGGGCTGCTGGTTCA
TCTTTGAAGAGCAAACGTGGACAAGAAGATGCGGCAAGCACAGATTCCAA
AGCACCAATGGGTCCTGTTTTCAGCTCTTTTGCGTATGAGGAGGAATCTG
GAAATGATTTGAAAATGGATGCTATCCATGCCTTTGCTAGAGAAGGAGAC
ATGGATAATCTGCTTAAATGTATTGAAAATGGTGTTTCTGTTAATTTGAG
AGATAGTGAGGGTCGTGCTCCATTGCATTGGGCTGTAGATCGCGGACACC
TGAACATCTCTGAACTACTTGTTAGCAAGAATGCTGATGTAAACGCCAAT
GACAATGAAGGACAAACTCCATTGCATTATGCTGTTGTATGTGATAGGGA
AGCCATTGCTCANTTTCTTGTGAAGCAAAATGCAGATATAGGCATGAAAG
ATGATGATGGCATTNCTNCTTGTCATGTCTGCGAAGTCGACTGGCCATGG
ATGCTACATGCTGCTAAAGGGACTGACTGATGGTTNGNTACATTGTCCTG
NCTGGC
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