EY758161

Overview
NameEY758161
Unique NameEY758161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY758161_ssr466 microsatellite EY758161_ssr466:466..477. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13803 contig Csv1_Contig13803:1..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            AI+CG VT+ L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS +T+C+ V+
Sbjct:   26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25
Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 2
Query:  128 VTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            V  AITCG V +SL+PC+ +L  GG   PPPCC+GV+ LNG A+TTPDRQ AC CL+ A    +G+ P++A+GLP +CGV IPY IS ST+C+ ++
Sbjct:   21 VDAAITCGTVASSLSPCLGYLSKGG-VVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSA---AKGVNPSLASGLPGKCGVSIPYPISTSTNCATIK 112          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 2
Query:  125 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            P   +++CG+VT+ LAPC+P+L   GR P   CC GV+ L GAA+T  DR+ AC CLK A  +I+GI    AAGLP  CGV IPYKISPSTDCS V+
Sbjct:   20 PHAESLSCGEVTSGLAPCLPYL--EGRGPLGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25
Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 2
Query:  134 NAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            +AITCG+V  +LAPC+ +L  GG  P   CC GVR+LN AA TTPDRQAACNCLK A G+I  +  N AA LP +C V IPYKIS ST+C+ +R
Sbjct:   23 SAITCGRVDTALAPCLGYL-QGGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  125 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            P   A++CGQV + LAPC+P+L   GR P   CC GV+ L GAA++  DR+ AC CLK A   I+GI    AAGLP  CGV IPYKISPSTDCS+V+
Sbjct:   20 PHAEALSCGQVQSGLAPCLPYL--QGRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.674e-25
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            AI+CG VT  L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNC+K A  +I  +  N AA LP +CGV IPYKIS ST+C+ V+
Sbjct:   25 AISCGAVTGDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.674e-25
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  125 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            P   A+TCGQVT++LAPC+P+L+  G  P   CC GV+ L G A+TT DRQ AC CLK A  +  G+    AA LPS C V IPYKISPSTDCS+V+
Sbjct:   20 PHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            A++CG VT  LAPCIP+L TGG  P   CC+GV+ L  AA TT DRQAACNCLK A G I  + P  AA LP +C V IPYKIS +T+C+ ++
Sbjct:   26 AVSCGTVTGDLAPCIPYL-TGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24
Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  140 ITCGQVTASLAPCIPFLITGGRFPPP-PCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            +TCGQVT +LAPC+ +L +    P P  CC+ VR LN AARTT D++ AC CLK+    + G+  N AAGLP++CGV IPYKISP+TDC+RV
Sbjct:   28 LTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.156e-24
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  125 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            P   A+TCGQVT++LAPC+P+L+  G  P   CC GV+ L G A+TT DRQAAC CLK A  +   +    AA LPS C V IPYKISPSTDCS+V+
Sbjct:   20 PHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114          
The following BLAST results are available for this feature:
BLAST of EY758161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP2_LENCU1.143e-2559.14Non-specific lipid-transfer protein 2 OS=Lens culi... [more]
NLTP4_ARATH3.326e-2555.21Non-specific lipid-transfer protein 4 OS=Arabidops... [more]
NLTP2_SOLLC3.326e-2556.70Non-specific lipid-transfer protein 2 OS=Solanum l... [more]
NLTP_CICAR4.344e-2559.57Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTP2_TOBAC4.344e-2556.70Non-specific lipid-transfer protein 2 OS=Nicotiana... [more]
NLTP5_LENCU5.674e-2558.06Non-specific lipid-transfer protein 5 OS=Lens culi... [more]
NLTP2_SOLPN5.674e-2556.70Non-specific lipid-transfer protein 2 OS=Solanum p... [more]
NLTP3_LENCU9.678e-2556.99Non-specific lipid-transfer protein 3 OS=Lens culi... [more]
NLTP_DAUCA1.651e-2456.52Non-specific lipid-transfer protein OS=Daucus caro... [more]
NLTP2_SOLCI2.156e-2456.70Non-specific lipid-transfer protein 2 OS=Solanum c... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-H04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758161 ID=EY758161; Name=EY758161; organism=Citrus sinensis; type=EST; length=679bp
ATTTCAAAGCCGACCCACGCGTCCGTGATAACTATTGATAACCAAGCAAA
AGCCTCCCTGACGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTTTG
CTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGCGG
GCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGATAACTGGAG
GGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACGGC
GCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACG
AGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCTTC
CTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCGAC
TGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAGTA
TGATTGACTGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTCTT
TGTCCGAACGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTTTG
TATATTTGCTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTTTT
GAGTGATTAATTATAGTTATTTTGTGGTATTATCTTAAANNAAAAAAAAA
NNANNAATAAAAAAATATAAAAAAAAAAA
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