EY758161

Overview
NameEY758161
Unique NameEY758161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.156e-24
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AI+CGQV ++++PC+ +   GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   27 AISCGQVNSAVSPCLSYA-RGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.156e-24
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AI+CGQV ++++PC+ +   GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   26 AISCGQVNSAVSPCLSYA-RGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.156e-24
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AI+CGQV ++++PC+ +   GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   27 AISCGQVNSAVSPCLSYA-RGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.816e-24
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AI+CGQV++++A C+ +    G  P   CCSGVRSLN AARTT DR+AACNCLK A   I G+    AA +PS+CGV +PY IS STDCSRV
Sbjct:   26 AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.678e-24
Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 2
Query:  128 VTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            V  AI+CG V  SLAPC  +L  GG   PP CC+GV++LN  A+TTPDRQ AC C++    +I G+ P++A+GLP +CGV IPY IS ST+C+ ++
Sbjct:   21 VDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 2
Query:  140 ITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            +TCGQV  +LA CI FL  GG   PP CC+GV+++  ++RTT DR+A C+CLK A G +RGI PN A  LP +CGV IPYKIS ST+C+ +
Sbjct:    1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            AI+CGQV+++L+PCI +    G  PP  CCSGV+ L GAA++T D+QAAC C+K A G   G+    AAG+PS CGV +PY IS S DCS++R
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AITCGQV +++ PC+ +   GG  P   CCSGVRSL  AA TT DR+ ACNCLK A   I+G+    AA +PS+CGV +PY IS S DCSRV
Sbjct:   25 AITCGQVNSAVGPCLTYA-RGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AITCGQV +++ PC+ +   GG  P   CCSGVRSL  AA TT DR+ ACNCLK A   I+G+    AA +PS+CGV +PY IS S DCSRV
Sbjct:   25 AITCGQVNSAVGPCLTYA-RGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            AI+CGQV+++L+PCI +    G  PP  CCSGV+ L GAA++T D+QAAC C+K A G   G+    AAG+PS CGV +PY IS S DCS++R
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
The following BLAST results are available for this feature:
BLAST of EY758161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP2_ORYSI2.156e-2457.61Non-specific lipid-transfer protein 2 OS=Oryza sat... [more]
NLT2B_ORYSJ2.156e-2457.61Non-specific lipid-transfer protein 2B OS=Oryza sa... [more]
NLT2A_ORYSJ2.156e-2457.61Non-specific lipid-transfer protein 2A OS=Oryza sa... [more]
NLTP1_SORBI2.816e-2458.70Non-specific lipid-transfer protein 1 OS=Sorghum b... [more]
NLTP3_ARATH3.678e-2452.08Non-specific lipid-transfer protein 3 OS=Arabidops... [more]
NLTP1_PHAAU6.273e-2456.04Non-specific lipid-transfer protein 1 OS=Phaseolus... [more]
NLT41_HORVU2.384e-2353.76Non-specific lipid-transfer protein 4.1 OS=Hordeum... [more]
NLTP1_ORYSJ3.113e-2356.52Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLTP1_ORYSI3.113e-2356.52Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLT43_HORVU3.113e-2353.76Non-specific lipid-transfer protein 4.3 OS=Hordeum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-H04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758161 ID=EY758161; Name=EY758161; organism=Citrus sinensis; type=EST; length=679bp
ATTTCAAAGCCGACCCACGCGTCCGTGATAACTATTGATAACCAAGCAAA
AGCCTCCCTGACGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTTTG
CTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGCGG
GCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGATAACTGGAG
GGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACGGC
GCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACG
AGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCTTC
CTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCGAC
TGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAGTA
TGATTGACTGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTCTT
TGTCCGAACGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTTTG
TATATTTGCTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTTTT
GAGTGATTAATTATAGTTATTTTGTGGTATTATCTTAAANNAAAAAAAAA
NNANNAATAAAAAAATATAAAAAAAAAAA
back to top