EY758161

Overview
NameEY758161
Unique NameEY758161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY758161_ssr466 microsatellite EY758161_ssr466:466..477. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13803 contig Csv1_Contig13803:1..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            AI+CGQV+++L+PCI +    G  PP  CCSGV+ L GAA++T D+QAAC C+K A G   G+    AAG+PS CGV +PY IS S DCS++R
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 2
Query:  140 ITCGQVTASLAPCIPFL----ITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            ITCG V++ LAPCI +L    + GG      CC G+++LN AA TTPDR+ ACNCLK A   I+GI    AAGLP  CGV IPY ISPST+C+ V
Sbjct:   28 ITCGMVSSKLAPCIGYLKGGPLGGG------CCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 2
Query:  134 NAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            +AI+CGQVT+ L PC  +L  GG  PP  CC+GVR LN AA+TTPDRQ AC CLK        I  N A  LP +CG+ I YKI+P+ DCS++
Sbjct:   24 DAISCGQVTSGLVPCFGYLAAGGPVPPA-CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23
Identity = 54/102 (52.94%), Postives = 72/102 (70.59%), Query Frame = 2
Query:  125 PVTN--AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            P+T+  A++CG V ++LA CI +++ GG  PP  CCSGV++LN  A+TTPDRQ ACNC++   RA G+  G+    AAG+P  CGV IPYKIS ST+C  VR
Sbjct:   20 PITSNAALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGS--GLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  134 NAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            +AITCGQV + L  C+ +   GG  PP  CC+GVR+LN  A+TTPDRQ ACNCLK       G+   + AG+P +CGV IPY I   TDC++VR
Sbjct:   21 SAITCGQVDSDLTSCLGYARKGGVIPPG-CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.183e-22
Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPN--VAAGLPSQCGVRIPYKISPSTDCSRVR 415
            A++CGQV  +L PCI ++  GG   P  CC+GVRSL   A+TT DRQ+ CNCLK+A   I     N  +AAGLP +CGV IPYKISPSTDC  ++
Sbjct:   30 AVSCGQVVNNLTPCINYVANGGALNPS-CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22
Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AI+CGQV+++L+PCI +    G  PP  CCSGV+ L GAA++T D+QAAC CLK    +I+GI     +G+P +CGV +P+ IS STDC++V
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22
Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 2
Query:  137 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNC-LKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            AI+CGQV++++ PC+ +    G  P   C SGVRSLN AARTT DR+AACNC LK A   + G+    A+ +P +CGVR+PY IS S DCSRV
Sbjct:    1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 2
Query:  125 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 412
            P+  AITCG V + LAPCI +L  G   P   CC G++SLN AA +  DR+ AC CLK A  +I+GI    AA LP QCGV +PY ISP+T+C+ +
Sbjct:   22 PLAEAITCGLVASKLAPCIGYL-QGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116          
BLAST of EY758161 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21
Identity = 51/99 (51.52%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  125 PVTN--AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 415
            P+T+  A++CG V+  +APCI +L       P  CCSGV SLN  ARTTPDRQ AC CL  A   +  I    AAGLP  CGV IPYKIS +T+C+ V+
Sbjct:   20 PITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118          
The following BLAST results are available for this feature:
BLAST of EY758161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLT42_HORVU3.113e-2353.76Non-specific lipid-transfer protein 4.2 OS=Hordeum... [more]
NLTP_SPIOL6.936e-2355.79Non-specific lipid-transfer protein OS=Spinacia ol... [more]
NLTP_GERHY6.936e-2353.76Non-specific lipid-transfer protein OS=Gerbera hyb... [more]
NLTP1_ARATH6.936e-2352.94Non-specific lipid-transfer protein 1 OS=Arabidops... [more]
SCA_LILLO9.058e-2352.13Stigma/stylar cysteine-rich adhesin OS=Lilium long... [more]
NLTP3_PRUDU1.183e-2254.74Non-specific lipid-transfer protein 3 OS=Prunus du... [more]
NLTP3_HORVU2.018e-2251.09Non-specific lipid-transfer protein 3 OS=Hordeum v... [more]
NLTP_ELECO4.495e-2253.76Non-specific lipid-transfer protein OS=Eleusine co... [more]
NLTP_BETVU7.668e-2251.04Non-specific lipid-transfer protein OS=Beta vulgar... [more]
NLTPD_BRAOT2.914e-2151.52Non-specific lipid-transfer protein D OS=Brassica ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-H04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758161 ID=EY758161; Name=EY758161; organism=Citrus sinensis; type=EST; length=679bp
ATTTCAAAGCCGACCCACGCGTCCGTGATAACTATTGATAACCAAGCAAA
AGCCTCCCTGACGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTTTG
CTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGCGG
GCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGATAACTGGAG
GGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACGGC
GCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACG
AGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCTTC
CTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCGAC
TGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAGTA
TGATTGACTGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTCTT
TGTCCGAACGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTTTG
TATATTTGCTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTTTT
GAGTGATTAATTATAGTTATTTTGTGGTATTATCTTAAANNAAAAAAAAA
NNANNAATAAAAAAATATAAAAAAAAAAA
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