EY758160

Overview
NameEY758160
Unique NameEY758160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_CHLPN (Ribulose-phosphate 3-epimerase OS=Chlamydia pneumoniae GN=rpe PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.532e-25
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  377 EVLQMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNP--XIEVXGGVGPKNA 742
            EV  MI  P + +  F+++GAD + VH E S  I     L+ IK  G +AG+  +P TS+  +   L   D+V++MSV P   G SF+ + ++KI+  R      G+     IEV GG+  ++A
Sbjct:   68 EVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIK--ELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKDSCLIEVDGGIDQQSA 189          

HSP 2 Score: 64.3142 bits (155), Expect = 2.532e-25
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 3
Query:   93 ESDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 272
            +  ++V PSI+ A+   LG + K +E AG D+IH+D+MDG FVPN+T GP ++ A+   T
Sbjct:    4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRST 63          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_MYCTU (Ribulose-phosphate 3-epimerase OS=Mycobacterium tuberculosis GN=rpe PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.231e-23
Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 3
Query:  105 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 272
            +++PSIL+A+FA+L ++  AV   G DW+HVDVMDG FVPN+TIG  VV++L  VT
Sbjct:    9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVT 62          

HSP 2 Score: 60.4622 bits (145), Expect = 2.231e-23
Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 2
Query:  389 MIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNPXIEVXGGV 727
            MI  P++  P + +AGA  V+ H E  +T +       I+  GAKAG+ + P T L     +L   D +L+MSV P   G  FI   + K+  +RKM     +   +E+ GG+
Sbjct:   71 MIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGI 181          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_MYCBO (Ribulose-phosphate 3-epimerase OS=Mycobacterium bovis GN=rpe PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.231e-23
Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 3
Query:  105 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 272
            +++PSIL+A+FA+L ++  AV   G DW+HVDVMDG FVPN+TIG  VV++L  VT
Sbjct:    9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVT 62          

HSP 2 Score: 60.4622 bits (145), Expect = 2.231e-23
Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 2
Query:  389 MIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNPXIEVXGGV 727
            MI  P++  P + +AGA  V+ H E  +T +       I+  GAKAG+ + P T L     +L   D +L+MSV P   G  FI   + K+  +RKM     +   +E+ GG+
Sbjct:   71 MIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGI 181          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_AQUAE (Ribulose-phosphate 3-epimerase OS=Aquifex aeolicus GN=rpe PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.103e-22
Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 2
Query:  389 MIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNP--XIEVXGGVGPKN 739
            MI  P++ +P F++AGA+ +SVH E +   H+HRTL  IK+LGAKAGVV+NP TSLSAIE  L   D VL+MSVNP   G  FIE  ++++  L++M   + +NP   IE+ GG+   N
Sbjct:   67 MIENPDKYIPKFVEAGANWISVHIENN--YHIHRTLQLIKELGAKAGVVVNPGTSLSAIEEALYYADYVLLMSVNPGFSGQKFIERSIERLRILKEM--RDRINPSCLIEIDGGIKENN 181          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE1_ORYSJ (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica GN=Os09g0505700 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.599e-20
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3
Query:  108 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 272
            ++PS+LS++FA L  +   +   G DW+H+D+MDG FVPN+TIG  V+ +LR  T
Sbjct:    9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT 63          

HSP 2 Score: 55.0694 bits (131), Expect = 4.599e-20
Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 2
Query:  389 MIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV---VDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNPXIEVXGGVGP 733
            M+  P   V    KAGA   + H E S   +    +  IK  G + GV L P T +  +  +++    V+LVL+M+V P   G  F+   ++K+  LRK       +  IEV GG+GP
Sbjct:   72 MVTNPSDYVEPLAKAGASGFTFHIEVSRD-NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRK----KYPSLDIEVDGGLGP 184          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_RHORU (Ribulose-phosphate 3-epimerase OS=Rhodospirillum rubrum GN=cbbE PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16
Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 2
Query:  413 VPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXL----RKMC----LENGVNP 703
            +  F +AGAD+++ H E S   H+HR++  I+  G KAGV LNPA+ LS ++ +L+ +DLVLIMSVNP   G SFI S + KI+ L    R+ C    ++ GVNP
Sbjct:   78 IDSFAEAGADMITFHPEASD--HVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALANGRRRACRGDRVDGGVNP 180          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_BUCBP (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpe PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.886e-14
Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 2
Query:  422 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNPXIEVXGGVGPKNAYR 748
            F K   +I+S H E  ST ++ +T+  IK  G K G+ LNP T L  ++ VLD +DL+L+MSVNP   G  FI S + KI  +R++  ++  N  +EV GG+   N ++
Sbjct:   83 FAKLDVNIISFHPE--STNNVEKTIKLIKSYGCKVGLALNPLTPLCVLDNVLDKIDLILLMSVNPGFPGQKFIPSILNKIRIVRELIDKSKKNILLEVDGGINLSNIFK 189          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_METJA (Ribulose-phosphate 3-epimerase OS=Methanocaldococcus jannaschii GN=rpe PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  488 RTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNPXIEVXGGVGPKNA 742
            R +N+IK +GAK  V LNPAT L AIE +L  V  VL+M+V P   G  FI    KKI  L+ M +ENG +  I V GG+  + A
Sbjct:   96 RIINRIKSIGAKPIVALNPATPLDAIEYILGDVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTKIFVDGGINVETA 180          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_HELPY (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori GN=rpe PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  443 IVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNPXIEVXGGVGPKNAY 745
            I+S+H E     H HR L  IK+LG   G+VLNP T   +I+ +L+ V LVL+MSVNP   G  F++  ++K   ++++      +  +EV GGV  KN +
Sbjct:   82 IISIHAENEK--HPHRVLQLIKNLGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKNIF 180          
BLAST of EY758160 vs. ExPASy Swiss-Prot
Match: RPE_HELPJ (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori J99 GN=rpe PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 2
Query:  422 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPXXCGHSFIESQVKKISXLRKMCLENGVNPXIEVXGGVGPKNAY 745
            F      I+S+H E     H HR L  IK  G   G+VLNP T   +I+ +L+ V LVL+MSVNP   G  F++  ++K   ++++      +  +EV GGV  KN +
Sbjct:   75 FAPLNPQIISIHAENEK--HPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKNIF 180          
The following BLAST results are available for this feature:
BLAST of EY758160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
RPE_CHLPN2.532e-2534.68Ribulose-phosphate 3-epimerase OS=Chlamydia pneumo... [more]
RPE_MYCTU2.231e-2357.14Ribulose-phosphate 3-epimerase OS=Mycobacterium tu... [more]
RPE_MYCBO2.231e-2357.14Ribulose-phosphate 3-epimerase OS=Mycobacterium bo... [more]
RPE_AQUAE1.103e-2248.74Ribulose-phosphate 3-epimerase OS=Aquifex aeolicus... [more]
RPE1_ORYSJ4.599e-2047.27Ribulose-phosphate 3-epimerase, cytoplasmic isofor... [more]
RPE_RHORU7.656e-1645.71Ribulose-phosphate 3-epimerase OS=Rhodospirillum r... [more]
RPE_BUCBP1.886e-1439.45Ribulose-phosphate 3-epimerase OS=Buchnera aphidic... [more]
RPE_METJA1.765e-1247.06Ribulose-phosphate 3-epimerase OS=Methanocaldococc... [more]
RPE_HELPY3.932e-1238.61Ribulose-phosphate 3-epimerase OS=Helicobacter pyl... [more]
RPE_HELPJ1.494e-1136.11Ribulose-phosphate 3-epimerase OS=Helicobacter pyl... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758160 ID=EY758160; Name=EY758160; organism=Citrus sinensis; type=EST; length=896bp
AAACCAATACTTAATCAGCCCACCTCACTTAGTTGTACACGGGGGATAAT
CCATACTATACTGCACGCATCATCCCGCGTGGATAATGCCTCGAAAGTGA
TATTATTGTTTCTCCATCTATTCTCTCTGCTAATTTCGCGAAGTTAGGCG
AGCAGGTAAAAGCAGTGGAATTGGCTGGTTGTGATTGGATTCATGTTGAT
GTCATGGATGGTCGTTTTGTTCCAAACATTACAATTGGACCTCTTGTGGT
TGATGCCTTGCGCCCTGTGACAGACCTTCCTTTGGATGTTCATTTGGTGT
TGTTTCTTTTGCATAGCTTTCTCATTGATCAAGTCATTTTCAAATAAAAG
ATATGCTTGCTTGCTGACATGAAGCTGAAGTGTTGCAGATGATTGTCGAA
CCTGAACAACGAGTGCCTGATTTTATCAAGGCTGGAGCAGACATAGTCAG
CGTCCACTGTGAGCAATCATCCACCATTCATTTGCACCGCACTCTTAACC
AAATAAAAGATTTGGGAGCTAAAGCTGGAGTTGTCCTTAACCCTGCTACC
TCACTGAGTGCAATAGAATGTGTCCTTGATGTGGTTGATCTTGTCTTGAT
CATGTCNGTGAACCCTGNCTNNTGTGGGCATAGCTTTATTGAGAGCCAAG
TNAAAAAAATCTCANACTTGAGAAAGATGTGTTTAGAGAATGGAGTNAAC
CCATGNATTGAAGTANATGGTGGAGTAGGTCCCAAAAATGCATATAGGNN
TATTGAGCTGGCGCCTATGCCCTNGTTGCTGGTTCANCTGCCTTTGGAGC
TAAAGATATGCTGAAGCTCTAAGGGGATTNATACCANCAAAAGCACAAGG
CAGTGCAGTGTGACAGATGATACAAAAAGGGATGTTAGATTCATCC
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